Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 RN7SL475P-201ENST00000583379 298 ntBASIC6.07□□□□□ -1.44
PKNOX1P55347 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.07□□□□□ -1.44
PKNOX1P55347 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 AL157762.1-201ENST00000619612 415 ntBASIC6.07□□□□□ -1.44
PKNOX1P55347 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.07□□□□□ -1.44
PKNOX1P55347 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
PKNOX1P55347 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 AL359091.1-201ENST00000449048 1734 ntBASIC6.07□□□□□ -1.44
PKNOX1P55347 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.07□□□□□ -1.44
PKNOX1P55347 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.06□□□□□ -1.44
PKNOX1P55347 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PKNOX1P55347 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.06□□□□□ -1.44
PKNOX1P55347 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PKNOX1P55347 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PKNOX1P55347 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.06□□□□□ -1.44
PKNOX1P55347 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PKNOX1P55347 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PKNOX1P55347 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PKNOX1P55347 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
PKNOX1P55347 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.06□□□□□ -1.44
PKNOX1P55347 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PKNOX1P55347 RNA5SP514-201ENST00000363717 111 ntBASIC6.06□□□□□ -1.44
PKNOX1P55347 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.06□□□□□ -1.44
PKNOX1P55347 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.06□□□□□ -1.44
PKNOX1P55347 ZNF37CP-201ENST00000406795 241 ntBASIC6.06□□□□□ -1.44
PKNOX1P55347 OR52N3P-201ENST00000413417 934 ntBASIC6.06□□□□□ -1.44
PKNOX1P55347 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.06□□□□□ -1.44
PKNOX1P55347 RPL21P50-201ENST00000417698 477 ntBASIC6.06□□□□□ -1.44
PKNOX1P55347 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.06□□□□□ -1.44
PKNOX1P55347 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.06□□□□□ -1.44
PKNOX1P55347 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.06□□□□□ -1.44
PKNOX1P55347 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PKNOX1P55347 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.06□□□□□ -1.44
PKNOX1P55347 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.06□□□□□ -1.44
PKNOX1P55347 RN7SL369P-201ENST00000477138 299 ntBASIC6.06□□□□□ -1.44
PKNOX1P55347 RN7SL326P-201ENST00000477493 296 ntBASIC6.06□□□□□ -1.44
PKNOX1P55347 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.06□□□□□ -1.44
PKNOX1P55347 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.06□□□□□ -1.44
PKNOX1P55347 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.06□□□□□ -1.44
PKNOX1P55347 IGKV2-19-201ENST00000518132 283 ntBASIC6.06□□□□□ -1.44
PKNOX1P55347 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PKNOX1P55347 AC084851.2-201ENST00000530377 364 ntBASIC6.06□□□□□ -1.44
PKNOX1P55347 OR9G2P-201ENST00000533326 880 ntBASIC6.06□□□□□ -1.44
PKNOX1P55347 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.06□□□□□ -1.44
PKNOX1P55347 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.06□□□□□ -1.44
PKNOX1P55347 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PKNOX1P55347 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PKNOX1P55347 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.06□□□□□ -1.44
PKNOX1P55347 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.06□□□□□ -1.44
PKNOX1P55347 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.06□□□□□ -1.44
PKNOX1P55347 Z93930.3-201ENST00000607919 749 ntBASIC6.06□□□□□ -1.44
PKNOX1P55347 AC069234.4-201ENST00000621276 412 ntBASIC6.06□□□□□ -1.44
PKNOX1P55347 MSL3P1-202ENST00000440028 1468 ntBASIC6.06□□□□□ -1.44
PKNOX1P55347 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PKNOX1P55347 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PKNOX1P55347 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PKNOX1P55347 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PKNOX1P55347 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PKNOX1P55347 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PKNOX1P55347 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PKNOX1P55347 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.06□□□□□ -1.44
PKNOX1P55347 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.06□□□□□ -1.44
PKNOX1P55347 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.06□□□□□ -1.44
PKNOX1P55347 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.06□□□□□ -1.44
PKNOX1P55347 AC114876.1-201ENST00000490962 1366 ntBASIC6.06□□□□□ -1.44
PKNOX1P55347 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PKNOX1P55347 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PKNOX1P55347 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
PKNOX1P55347 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.05□□□□□ -1.44
PKNOX1P55347 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.05□□□□□ -1.44
PKNOX1P55347 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.05□□□□□ -1.44
PKNOX1P55347 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.05□□□□□ -1.44
PKNOX1P55347 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PKNOX1P55347 AC123769.1-201ENST00000530992 3192 ntBASIC6.05□□□□□ -1.44
PKNOX1P55347 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PKNOX1P55347 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PKNOX1P55347 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PKNOX1P55347 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.05□□□□□ -1.44
PKNOX1P55347 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PKNOX1P55347 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PKNOX1P55347 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.05□□□□□ -1.44
PKNOX1P55347 AC006509.1-201ENST00000420788 634 ntBASIC6.05□□□□□ -1.44
PKNOX1P55347 AC092646.1-201ENST00000427142 901 ntBASIC6.05□□□□□ -1.44
PKNOX1P55347 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.05□□□□□ -1.44
PKNOX1P55347 EMC3-AS1-205ENST00000438698 534 ntBASIC6.05□□□□□ -1.44
PKNOX1P55347 NPM1P23-201ENST00000440193 849 ntBASIC6.05□□□□□ -1.44
PKNOX1P55347 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.05□□□□□ -1.44
PKNOX1P55347 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.05□□□□□ -1.44
PKNOX1P55347 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PKNOX1P55347 AC112187.1-201ENST00000455837 479 ntBASIC6.05□□□□□ -1.44
PKNOX1P55347 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PKNOX1P55347 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
PKNOX1P55347 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.05□□□□□ -1.44
PKNOX1P55347 AC008945.1-201ENST00000505144 499 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms