Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.16□□□□□ -1.26
HMGCS2P54868 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.16□□□□□ -1.26
HMGCS2P54868 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.16□□□□□ -1.26
HMGCS2P54868 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.16□□□□□ -1.26
HMGCS2P54868 RN7SL787P-201ENST00000613000 284 ntBASIC7.16□□□□□ -1.26
HMGCS2P54868 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
HMGCS2P54868 AC018659.2-201ENST00000624690 715 ntBASIC7.16□□□□□ -1.26
HMGCS2P54868 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.16□□□□□ -1.26
HMGCS2P54868 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
HMGCS2P54868 RARSP1-201ENST00000542842 1418 ntBASIC7.16□□□□□ -1.26
HMGCS2P54868 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
HMGCS2P54868 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.16□□□□□ -1.26
HMGCS2P54868 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGCS2P54868 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.16□□□□□ -1.26
HMGCS2P54868 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGCS2P54868 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.16□□□□□ -1.26
HMGCS2P54868 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
HMGCS2P54868 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HMGCS2P54868 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.26
HMGCS2P54868 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGCS2P54868 MAPK10-287ENST00000641217 3037 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.15□□□□□ -1.26
HMGCS2P54868 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.15□□□□□ -1.26
HMGCS2P54868 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HMGCS2P54868 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HMGCS2P54868 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HMGCS2P54868 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HMGCS2P54868 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
HMGCS2P54868 RNA5SP478-201ENST00000364657 115 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 AC245060.4-201ENST00000413293 1121 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HMGCS2P54868 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.15□□□□□ -1.26
HMGCS2P54868 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.15□□□□□ -1.26
HMGCS2P54868 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.15□□□□□ -1.26
HMGCS2P54868 TRIM60P16-201ENST00000444048 694 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 SUMO2P10-201ENST00000452006 288 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
HMGCS2P54868 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.15□□□□□ -1.26
HMGCS2P54868 RPL7L1P4-201ENST00000513004 707 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 SETP21-201ENST00000514799 892 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.15□□□□□ -1.26
HMGCS2P54868 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HMGCS2P54868 AC112191.2-201ENST00000522428 333 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.15□□□□□ -1.26
HMGCS2P54868 AP000662.1-201ENST00000530952 487 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 AC079600.1-201ENST00000550326 297 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.15□□□□□ -1.26
HMGCS2P54868 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
HMGCS2P54868 ZNF322P1-201ENST00000568013 1209 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 SNORD95-201ENST00000579879 68 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 NPM1P45-201ENST00000583151 559 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 AC027229.1-201ENST00000583887 253 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGCS2P54868 AC097467.4-201ENST00000605504 141 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.15□□□□□ -1.26
HMGCS2P54868 AC004477.3-201ENST00000614061 590 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGCS2P54868 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGCS2P54868 OR7A1P-202ENST00000641542 1158 ntBASIC7.15□□□□□ -1.26
HMGCS2P54868 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HMGCS2P54868 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
HMGCS2P54868 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.15□□□□□ -1.27
HMGCS2P54868 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.15□□□□□ -1.27
HMGCS2P54868 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
HMGCS2P54868 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
HMGCS2P54868 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.15□□□□□ -1.27
HMGCS2P54868 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.15□□□□□ -1.27
HMGCS2P54868 AC127024.8-201ENST00000623719 2094 ntBASIC7.15□□□□□ -1.27
HMGCS2P54868 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.15□□□□□ -1.27
HMGCS2P54868 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.14□□□□□ -1.27
HMGCS2P54868 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
HMGCS2P54868 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 BX322650.1-201ENST00000332359 2143 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
HMGCS2P54868 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 OR11H13P-201ENST00000359695 979 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.14□□□□□ -1.27
HMGCS2P54868 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 RN7SKP286-201ENST00000410894 299 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 AL096829.1-201ENST00000413677 457 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGCS2P54868 AL512637.1-201ENST00000439523 1231 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 DNAJC19P5-201ENST00000443295 316 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 AC092967.1-201ENST00000449016 481 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 MGAT2P1-201ENST00000449718 797 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
HMGCS2P54868 AC092865.4-201ENST00000477936 615 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGCS2P54868 RPS4XP14-201ENST00000493072 781 ntBASIC7.14□□□□□ -1.27
HMGCS2P54868 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGCS2P54868 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.14□□□□□ -1.27
HMGCS2P54868 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.14□□□□□ -1.27
HMGCS2P54868 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGCS2P54868 WBP1LP3-201ENST00000523033 208 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms