Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.87□□□□□ -1.31
CLCN3P51790 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
CLCN3P51790 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.87□□□□□ -1.31
CLCN3P51790 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.87□□□□□ -1.31
CLCN3P51790 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.87□□□□□ -1.31
CLCN3P51790 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.87□□□□□ -1.31
CLCN3P51790 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.87□□□□□ -1.31
CLCN3P51790 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.87□□□□□ -1.31
CLCN3P51790 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CLCN3P51790 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CLCN3P51790 AC022905.1-201ENST00000503430 3048 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CLCN3P51790 FAM32BP-201ENST00000344033 333 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.87□□□□□ -1.31
CLCN3P51790 AL132875.1-201ENST00000403623 949 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 UBE2V1P14-201ENST00000415815 558 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 AC066692.1-201ENST00000421721 457 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 AC097721.1-201ENST00000427150 1253 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.87□□□□□ -1.31
CLCN3P51790 ATP5LP2-201ENST00000440646 311 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 SNX18P26-201ENST00000458433 740 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.87□□□□□ -1.31
CLCN3P51790 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.87□□□□□ -1.31
CLCN3P51790 LSM3P4-201ENST00000502948 309 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.87□□□□□ -1.31
CLCN3P51790 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.87□□□□□ -1.31
CLCN3P51790 AC021269.1-201ENST00000526860 705 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.87□□□□□ -1.31
CLCN3P51790 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.87□□□□□ -1.31
CLCN3P51790 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.87□□□□□ -1.31
CLCN3P51790 AC027229.1-201ENST00000583887 253 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.87□□□□□ -1.31
CLCN3P51790 AC108865.2-201ENST00000606881 432 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.87□□□□□ -1.31
CLCN3P51790 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.87□□□□□ -1.31
CLCN3P51790 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 AL589993.1-201ENST00000407450 2524 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 AC008627.1-201ENST00000517511 1704 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.87□□□□□ -1.31
CLCN3P51790 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN3P51790 AC093829.1-201ENST00000506662 1618 ntBASIC6.87□□□□□ -1.31
CLCN3P51790 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.86□□□□□ -1.31
CLCN3P51790 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN3P51790 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN3P51790 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN3P51790 BIN2P1-201ENST00000504996 1530 ntBASIC6.86□□□□□ -1.31
CLCN3P51790 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.86□□□□□ -1.31
CLCN3P51790 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.86□□□□□ -1.31
CLCN3P51790 OR11H13P-201ENST00000359695 979 ntBASIC6.86□□□□□ -1.31
CLCN3P51790 RNU1-134P-201ENST00000362935 165 ntBASIC6.86□□□□□ -1.31
CLCN3P51790 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN3P51790 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.86□□□□□ -1.31
CLCN3P51790 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.86□□□□□ -1.31
CLCN3P51790 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.86□□□□□ -1.31
CLCN3P51790 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.86□□□□□ -1.31
CLCN3P51790 AC090568.1-201ENST00000509499 856 ntBASIC6.86□□□□□ -1.31
CLCN3P51790 AC006499.4-201ENST00000510947 694 ntBASIC6.86□□□□□ -1.31
CLCN3P51790 AC090958.1-201ENST00000511122 351 ntBASIC6.86□□□□□ -1.31
CLCN3P51790 AC253576.1-201ENST00000511645 1156 ntBASIC6.86□□□□□ -1.31
CLCN3P51790 TRIM77BP-201ENST00000524985 1119 ntBASIC6.86□□□□□ -1.31
CLCN3P51790 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.86□□□□□ -1.31
CLCN3P51790 LINC00556-201ENST00000569603 412 ntBASIC6.86□□□□□ -1.31
CLCN3P51790 AC020765.1-201ENST00000604296 328 ntBASIC6.86□□□□□ -1.31
CLCN3P51790 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.86□□□□□ -1.31
CLCN3P51790 AC024884.1-201ENST00000620583 399 ntBASIC6.86□□□□□ -1.31
CLCN3P51790 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN3P51790 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CLCN3P51790 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN3P51790 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN3P51790 AL021877.2-201ENST00000624442 10684 ntBASIC6.86□□□□□ -1.31
CLCN3P51790 AC062029.1-202ENST00000606164 3651 ntBASIC6.86□□□□□ -1.31
CLCN3P51790 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.86□□□□□ -1.31
CLCN3P51790 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.86□□□□□ -1.31
CLCN3P51790 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.86□□□□□ -1.31
CLCN3P51790 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN3P51790 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN3P51790 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN3P51790 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.86□□□□□ -1.31
CLCN3P51790 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.86□□□□□ -1.31
CLCN3P51790 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN3P51790 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CLCN3P51790 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.85□□□□□ -1.31
CLCN3P51790 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
CLCN3P51790 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms