Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
APOBEC1P41238 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.8□□□□□ -1.48
APOBEC1P41238 AC093816.1-201ENST00000515076 913 ntBASIC5.8□□□□□ -1.48
APOBEC1P41238 COX6B1P4-201ENST00000519826 484 ntBASIC5.8□□□□□ -1.48
APOBEC1P41238 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.8□□□□□ -1.48
APOBEC1P41238 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
APOBEC1P41238 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
APOBEC1P41238 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.8□□□□□ -1.48
APOBEC1P41238 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.8□□□□□ -1.48
APOBEC1P41238 TDGP1-201ENST00000543961 1229 ntBASIC5.8□□□□□ -1.48
APOBEC1P41238 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
APOBEC1P41238 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.8□□□□□ -1.48
APOBEC1P41238 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.8□□□□□ -1.48
APOBEC1P41238 AC025283.1-201ENST00000572039 734 ntBASIC5.8□□□□□ -1.48
APOBEC1P41238 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.8□□□□□ -1.48
APOBEC1P41238 MIR3157-201ENST00000578688 85 ntBASIC5.8□□□□□ -1.48
APOBEC1P41238 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.8□□□□□ -1.48
APOBEC1P41238 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.8□□□□□ -1.48
APOBEC1P41238 VN1R81P-201ENST00000602085 372 ntBASIC5.8□□□□□ -1.48
APOBEC1P41238 AC068726.1-201ENST00000610993 341 ntBASIC5.8□□□□□ -1.48
APOBEC1P41238 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.8□□□□□ -1.48
APOBEC1P41238 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
APOBEC1P41238 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
APOBEC1P41238 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
APOBEC1P41238 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
APOBEC1P41238 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
APOBEC1P41238 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
APOBEC1P41238 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
APOBEC1P41238 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.8□□□□□ -1.48
APOBEC1P41238 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
APOBEC1P41238 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
APOBEC1P41238 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
APOBEC1P41238 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.79□□□□□ -1.48
APOBEC1P41238 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
APOBEC1P41238 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.79□□□□□ -1.48
APOBEC1P41238 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
APOBEC1P41238 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.79□□□□□ -1.48
APOBEC1P41238 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 RNU6-386P-201ENST00000362650 107 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 RNA5SP485-201ENST00000365053 119 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.79□□□□□ -1.48
APOBEC1P41238 MT-RNR1-201ENST00000389680 954 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.79□□□□□ -1.48
APOBEC1P41238 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 AL139039.2-201ENST00000407436 479 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 U3.43-201ENST00000410734 213 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 AC017035.1-201ENST00000411999 1115 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.79□□□□□ -1.48
APOBEC1P41238 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.79□□□□□ -1.48
APOBEC1P41238 AC064862.5-201ENST00000440618 334 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.79□□□□□ -1.48
APOBEC1P41238 RBMY2HP-201ENST00000457961 720 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.79□□□□□ -1.48
APOBEC1P41238 MRPL57P6-201ENST00000506570 309 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
APOBEC1P41238 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.79□□□□□ -1.48
APOBEC1P41238 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.79□□□□□ -1.48
APOBEC1P41238 AC010343.2-201ENST00000510162 224 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.79□□□□□ -1.48
APOBEC1P41238 RNA5SP116-201ENST00000516132 98 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.79□□□□□ -1.48
APOBEC1P41238 AC009120.3-201ENST00000563335 499 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.79□□□□□ -1.48
APOBEC1P41238 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.79□□□□□ -1.48
APOBEC1P41238 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.79□□□□□ -1.48
APOBEC1P41238 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.79□□□□□ -1.48
APOBEC1P41238 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.79□□□□□ -1.48
APOBEC1P41238 AC026898.1-201ENST00000586404 571 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.79□□□□□ -1.48
APOBEC1P41238 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.79□□□□□ -1.48
APOBEC1P41238 AC011497.2-201ENST00000600255 639 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 AC097641.3-201ENST00000613523 464 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 GAPDHP41-201ENST00000613707 975 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 AC103798.2-201ENST00000624292 632 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 HPVC1-201ENST00000629899 1198 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 CUBNP3-201ENST00000457461 1784 ntBASIC5.79□□□□□ -1.48
APOBEC1P41238 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.79□□□□□ -1.48
APOBEC1P41238 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.79□□□□□ -1.48
APOBEC1P41238 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.79□□□□□ -1.48
APOBEC1P41238 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
APOBEC1P41238 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.79□□□□□ -1.48
APOBEC1P41238 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.79□□□□□ -1.48
APOBEC1P41238 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
APOBEC1P41238 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
APOBEC1P41238 AC139426.3-201ENST00000605648 2059 ntBASIC5.78□□□□□ -1.48
APOBEC1P41238 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
APOBEC1P41238 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms