Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.74□□□□□ -1.49
SHC1P29353 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.74□□□□□ -1.49
SHC1P29353 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 SNORD16-201ENST00000362803 99 ntBASIC5.74□□□□□ -1.49
SHC1P29353 RNA5SP350-201ENST00000363298 111 ntBASIC5.74□□□□□ -1.49
SHC1P29353 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SHC1P29353 AL157702.1-201ENST00000398764 426 ntBASIC5.74□□□□□ -1.49
SHC1P29353 MTND2P12-201ENST00000417560 1252 ntBASIC5.74□□□□□ -1.49
SHC1P29353 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.74□□□□□ -1.49
SHC1P29353 OR2L9P-201ENST00000444456 913 ntBASIC5.74□□□□□ -1.49
SHC1P29353 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.74□□□□□ -1.49
SHC1P29353 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.74□□□□□ -1.49
SHC1P29353 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.74□□□□□ -1.49
SHC1P29353 H3F3AP5-201ENST00000475267 429 ntBASIC5.74□□□□□ -1.49
SHC1P29353 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.74□□□□□ -1.49
SHC1P29353 LDHBP3-201ENST00000514909 822 ntBASIC5.74□□□□□ -1.49
SHC1P29353 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.74□□□□□ -1.49
SHC1P29353 IGKV1D-22-201ENST00000518953 324 ntBASIC5.74□□□□□ -1.49
SHC1P29353 COX6B1P4-201ENST00000519826 484 ntBASIC5.74□□□□□ -1.49
SHC1P29353 AP003033.2-201ENST00000528901 805 ntBASIC5.74□□□□□ -1.49
SHC1P29353 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SHC1P29353 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.74□□□□□ -1.49
SHC1P29353 AL162377.2-201ENST00000624532 337 ntBASIC5.74□□□□□ -1.49
SHC1P29353 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.74□□□□□ -1.49
SHC1P29353 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SHC1P29353 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.74□□□□□ -1.49
SHC1P29353 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.74□□□□□ -1.49
SHC1P29353 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SHC1P29353 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.74□□□□□ -1.49
SHC1P29353 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHC1P29353 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHC1P29353 LINC01613-201ENST00000561476 2780 ntBASIC5.73□□□□□ -1.49
SHC1P29353 AL731532.1-201ENST00000623972 4236 ntBASIC5.73□□□□□ -1.49
SHC1P29353 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.73□□□□□ -1.49
SHC1P29353 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
SHC1P29353 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SHC1P29353 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHC1P29353 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
SHC1P29353 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SHC1P29353 RN7SKP250-201ENST00000363924 321 ntBASIC5.73□□□□□ -1.49
SHC1P29353 RN7SKP171-201ENST00000364417 303 ntBASIC5.73□□□□□ -1.49
SHC1P29353 RPL7P58-201ENST00000402913 758 ntBASIC5.73□□□□□ -1.49
SHC1P29353 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHC1P29353 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.73□□□□□ -1.49
SHC1P29353 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.73□□□□□ -1.49
SHC1P29353 AC245884.2-201ENST00000426257 404 ntBASIC5.73□□□□□ -1.49
SHC1P29353 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.73□□□□□ -1.49
SHC1P29353 CXCR2P1-202ENST00000443392 1074 ntBASIC5.73□□□□□ -1.49
SHC1P29353 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.73□□□□□ -1.49
SHC1P29353 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.73□□□□□ -1.49
SHC1P29353 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
SHC1P29353 EIF4E2P2-201ENST00000492033 736 ntBASIC5.73□□□□□ -1.49
SHC1P29353 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.73□□□□□ -1.49
SHC1P29353 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.73□□□□□ -1.49
SHC1P29353 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.73□□□□□ -1.49
SHC1P29353 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.73□□□□□ -1.49
SHC1P29353 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHC1P29353 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.73□□□□□ -1.49
SHC1P29353 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.73□□□□□ -1.49
SHC1P29353 MT1CP-201ENST00000567054 174 ntBASIC5.73□□□□□ -1.49
SHC1P29353 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.73□□□□□ -1.49
SHC1P29353 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.73□□□□□ -1.49
SHC1P29353 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.73□□□□□ -1.49
SHC1P29353 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.73□□□□□ -1.49
SHC1P29353 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.73□□□□□ -1.49
SHC1P29353 AL445649.1-201ENST00000615941 691 ntBASIC5.73□□□□□ -1.49
SHC1P29353 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.73□□□□□ -1.49
SHC1P29353 OR7E91P-202ENST00000642062 1198 ntBASIC5.73□□□□□ -1.49
SHC1P29353 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SHC1P29353 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHC1P29353 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SHC1P29353 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SHC1P29353 CASC19-246ENST00000641625 1606 ntBASIC5.73□□□□□ -1.49
SHC1P29353 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHC1P29353 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHC1P29353 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.73□□□□□ -1.49
SHC1P29353 AL136984.1-201ENST00000607611 1893 ntBASIC5.73□□□□□ -1.49
SHC1P29353 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.72□□□□□ -1.49
SHC1P29353 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SHC1P29353 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.72□□□□□ -1.49
SHC1P29353 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.72□□□□□ -1.49
SHC1P29353 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms