Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BDNFP23560 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.91□□□□□ -1.3
BDNFP23560 H3F3AP3-201ENST00000497682 407 ntBASIC6.91□□□□□ -1.3
BDNFP23560 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.91□□□□□ -1.3
BDNFP23560 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.91□□□□□ -1.3
BDNFP23560 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.91□□□□□ -1.3
BDNFP23560 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.91□□□□□ -1.3
BDNFP23560 AC135983.3-201ENST00000528049 1226 ntBASIC6.91□□□□□ -1.3
BDNFP23560 OR52K3P-201ENST00000531655 943 ntBASIC6.91□□□□□ -1.3
BDNFP23560 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.91□□□□□ -1.3
BDNFP23560 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.91□□□□□ -1.3
BDNFP23560 AC121758.1-202ENST00000556917 658 ntBASIC6.91□□□□□ -1.3
BDNFP23560 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.91□□□□□ -1.3
BDNFP23560 AC018558.5-201ENST00000565840 952 ntBASIC6.91□□□□□ -1.3
BDNFP23560 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.91□□□□□ -1.3
BDNFP23560 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BDNFP23560 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.91□□□□□ -1.3
BDNFP23560 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.91□□□□□ -1.3
BDNFP23560 AL157899.1-201ENST00000604110 936 ntBASIC6.91□□□□□ -1.3
BDNFP23560 AL136097.3-201ENST00000611097 505 ntBASIC6.91□□□□□ -1.3
BDNFP23560 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BDNFP23560 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BDNFP23560 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BDNFP23560 SAMM50P1-201ENST00000455403 1399 ntBASIC6.91□□□□□ -1.3
BDNFP23560 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.91□□□□□ -1.3
BDNFP23560 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BDNFP23560 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
BDNFP23560 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
BDNFP23560 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BDNFP23560 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BDNFP23560 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BDNFP23560 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BDNFP23560 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BDNFP23560 AC010401.2-201ENST00000575137 4934 ntBASIC6.9□□□□□ -1.3
BDNFP23560 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
BDNFP23560 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
BDNFP23560 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
BDNFP23560 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.9□□□□□ -1.3
BDNFP23560 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.9□□□□□ -1.3
BDNFP23560 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
BDNFP23560 RNA5SP512-201ENST00000364550 120 ntBASIC6.9□□□□□ -1.3
BDNFP23560 RNA5SP77-201ENST00000365394 120 ntBASIC6.9□□□□□ -1.3
BDNFP23560 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
BDNFP23560 MIR640-201ENST00000385086 96 ntBASIC6.9□□□□□ -1.3
BDNFP23560 AC245036.1-201ENST00000391727 309 ntBASIC6.9□□□□□ -1.3
BDNFP23560 YWHAZP4-201ENST00000392459 708 ntBASIC6.9□□□□□ -1.3
BDNFP23560 PRELID1P1-201ENST00000403549 660 ntBASIC6.9□□□□□ -1.3
BDNFP23560 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
BDNFP23560 ARAFP1-201ENST00000422172 605 ntBASIC6.9□□□□□ -1.3
BDNFP23560 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.9□□□□□ -1.3
BDNFP23560 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
BDNFP23560 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.9□□□□□ -1.3
BDNFP23560 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.9□□□□□ -1.3
BDNFP23560 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.9□□□□□ -1.3
BDNFP23560 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.9□□□□□ -1.3
BDNFP23560 COX4I1P2-201ENST00000447446 547 ntBASIC6.9□□□□□ -1.3
BDNFP23560 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.9□□□□□ -1.3
BDNFP23560 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
BDNFP23560 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.9□□□□□ -1.3
BDNFP23560 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.9□□□□□ -1.3
BDNFP23560 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.9□□□□□ -1.3
BDNFP23560 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.9□□□□□ -1.3
BDNFP23560 AC107015.1-201ENST00000466902 747 ntBASIC6.9□□□□□ -1.3
BDNFP23560 RPL23AP64-201ENST00000469465 435 ntBASIC6.9□□□□□ -1.3
BDNFP23560 SEPT7P6-201ENST00000469999 1143 ntBASIC6.9□□□□□ -1.3
BDNFP23560 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.9□□□□□ -1.3
BDNFP23560 AC117500.1-201ENST00000497352 755 ntBASIC6.9□□□□□ -1.3
BDNFP23560 AC106822.1-201ENST00000502647 526 ntBASIC6.9□□□□□ -1.3
BDNFP23560 AC083906.1-201ENST00000509298 406 ntBASIC6.9□□□□□ -1.3
BDNFP23560 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.9□□□□□ -1.3
BDNFP23560 IGHV3-57-201ENST00000520143 280 ntBASIC6.9□□□□□ -1.3
BDNFP23560 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.9□□□□□ -1.3
BDNFP23560 OR4A41P-201ENST00000533053 928 ntBASIC6.9□□□□□ -1.3
BDNFP23560 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.9□□□□□ -1.3
BDNFP23560 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.9□□□□□ -1.3
BDNFP23560 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.9□□□□□ -1.3
BDNFP23560 AP001264.1-201ENST00000620602 703 ntBASIC6.9□□□□□ -1.3
BDNFP23560 AC012653.2-201ENST00000621880 420 ntBASIC6.9□□□□□ -1.3
BDNFP23560 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.9□□□□□ -1.3
BDNFP23560 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
BDNFP23560 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
BDNFP23560 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.9□□□□□ -1.3
BDNFP23560 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BDNFP23560 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BDNFP23560 AL353743.3-201ENST00000442109 1468 ntBASIC6.9□□□□□ -1.31
BDNFP23560 API5P1-201ENST00000424316 1510 ntBASIC6.9□□□□□ -1.31
BDNFP23560 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.9□□□□□ -1.31
BDNFP23560 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BDNFP23560 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BDNFP23560 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BDNFP23560 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
BDNFP23560 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.9□□□□□ -1.31
BDNFP23560 AC105114.1-201ENST00000624795 1862 ntBASIC6.9□□□□□ -1.31
BDNFP23560 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BDNFP23560 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
BDNFP23560 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BDNFP23560 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
BDNFP23560 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.89□□□□□ -1.31
BDNFP23560 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
BDNFP23560 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms