Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFRAP16234 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFRAP16234 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.62□□□□□ -1.35
PDGFRAP16234 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFRAP16234 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFRAP16234 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
PDGFRAP16234 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
PDGFRAP16234 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFRAP16234 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFRAP16234 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.62□□□□□ -1.35
PDGFRAP16234 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFRAP16234 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFRAP16234 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
PDGFRAP16234 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
PDGFRAP16234 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.62□□□□□ -1.35
PDGFRAP16234 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFRAP16234 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFRAP16234 RNA5SP232-201ENST00000364144 119 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFRAP16234 AP003170.5-201ENST00000397185 335 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 AC099535.1-201ENST00000408928 371 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFRAP16234 RNA5SP115-201ENST00000411160 107 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFRAP16234 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFRAP16234 EMC3-AS1-205ENST00000438698 534 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFRAP16234 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFRAP16234 RN7SL165P-201ENST00000477476 291 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 RPL17P2-201ENST00000491913 451 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 RN7SL649P-201ENST00000496974 275 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 FTH1P8-201ENST00000498161 514 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFRAP16234 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.62□□□□□ -1.35
PDGFRAP16234 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFRAP16234 RNA5SP116-201ENST00000516132 98 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFRAP16234 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.62□□□□□ -1.35
PDGFRAP16234 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFRAP16234 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFRAP16234 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFRAP16234 MIR7159-201ENST00000620587 66 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFRAP16234 AC022726.2-201ENST00000634673 547 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 AC010325.3-201ENST00000641084 394 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 OR7E91P-202ENST00000642062 1198 ntBASIC6.62□□□□□ -1.35
PDGFRAP16234 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
PDGFRAP16234 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFRAP16234 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFRAP16234 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.62□□□□□ -1.35
PDGFRAP16234 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFRAP16234 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.61□□□□□ -1.35
PDGFRAP16234 TET1P1-201ENST00000426627 2301 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 AC079753.1-201ENST00000623243 3868 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
PDGFRAP16234 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFRAP16234 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.61□□□□□ -1.35
PDGFRAP16234 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFRAP16234 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFRAP16234 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFRAP16234 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFRAP16234 AL022323.4-201ENST00000623980 13120 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 RN7SKP161-201ENST00000411110 305 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 DHFRP2-201ENST00000414224 547 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFRAP16234 VN1R20P-201ENST00000425215 966 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 MRPS21P3-201ENST00000436696 262 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 OR13K1P-201ENST00000444577 975 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 AC007383.1-201ENST00000445875 636 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 EEF1B2P3-201ENST00000447718 678 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFRAP16234 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFRAP16234 RN7SL369P-201ENST00000477138 299 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.61□□□□□ -1.35
PDGFRAP16234 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFRAP16234 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFRAP16234 CYCSP25-201ENST00000525280 316 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFRAP16234 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFRAP16234 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.61□□□□□ -1.35
PDGFRAP16234 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.61□□□□□ -1.35
PDGFRAP16234 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 SNORA74.4-201ENST00000607595 199 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 AC006924.1-201ENST00000610750 559 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFRAP16234 AC009120.7-201ENST00000623452 780 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFRAP16234 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFRAP16234 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFRAP16234 CCAT2-201ENST00000630920 1752 ntBASIC6.61□□□□□ -1.35
PDGFRAP16234 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.61□□□□□ -1.35
PDGFRAP16234 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFRAP16234 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFRAP16234 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFRAP16234 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFRAP16234 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFRAP16234 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFRAP16234 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.6□□□□□ -1.35
PDGFRAP16234 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.6□□□□□ -1.35
PDGFRAP16234 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms