Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.52□□□□□ -1.37
RETP07949 AL133399.1-201ENST00000527476 298 ntBASIC6.52□□□□□ -1.37
RETP07949 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.52□□□□□ -1.37
RETP07949 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.52□□□□□ -1.37
RETP07949 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.52□□□□□ -1.37
RETP07949 LINC00556-201ENST00000569603 412 ntBASIC6.52□□□□□ -1.37
RETP07949 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.52□□□□□ -1.37
RETP07949 AC067852.5-201ENST00000589299 310 ntBASIC6.52□□□□□ -1.37
RETP07949 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.52□□□□□ -1.37
RETP07949 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.52□□□□□ -1.37
RETP07949 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.52□□□□□ -1.37
RETP07949 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.52□□□□□ -1.37
RETP07949 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
RETP07949 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RETP07949 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.52□□□□□ -1.37
RETP07949 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.52□□□□□ -1.37
RETP07949 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.52□□□□□ -1.37
RETP07949 AC025809.2-201ENST00000625085 1802 ntBASIC6.52□□□□□ -1.37
RETP07949 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 AL136531.3-201ENST00000624378 3658 ntBASIC6.52□□□□□ -1.37
RETP07949 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.52□□□□□ -1.37
RETP07949 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 AP001157.1-201ENST00000550837 2339 ntBASIC6.51□□□□□ -1.37
RETP07949 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RETP07949 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.51□□□□□ -1.37
RETP07949 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.51□□□□□ -1.37
RETP07949 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RETP07949 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.51□□□□□ -1.37
RETP07949 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RETP07949 AL359694.2-201ENST00000567753 1615 ntBASIC6.51□□□□□ -1.37
RETP07949 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RETP07949 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RETP07949 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RETP07949 SNORA51.9-201ENST00000384295 124 ntBASIC6.51□□□□□ -1.37
RETP07949 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RETP07949 AC096537.2-201ENST00000413707 714 ntBASIC6.51□□□□□ -1.37
RETP07949 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.51□□□□□ -1.37
RETP07949 RPS14P4-201ENST00000415880 418 ntBASIC6.51□□□□□ -1.37
RETP07949 RPS7P12-201ENST00000422385 582 ntBASIC6.51□□□□□ -1.37
RETP07949 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.51□□□□□ -1.37
RETP07949 EMC3-AS1-205ENST00000438698 534 ntBASIC6.51□□□□□ -1.37
RETP07949 AL161636.2-201ENST00000445179 927 ntBASIC6.51□□□□□ -1.37
RETP07949 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.51□□□□□ -1.37
RETP07949 RN7SL273P-201ENST00000481561 299 ntBASIC6.51□□□□□ -1.37
RETP07949 RN7SL629P-201ENST00000489622 285 ntBASIC6.51□□□□□ -1.37
RETP07949 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.51□□□□□ -1.37
RETP07949 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RETP07949 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.51□□□□□ -1.37
RETP07949 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RETP07949 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.51□□□□□ -1.37
RETP07949 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.51□□□□□ -1.37
RETP07949 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RETP07949 AC239803.2-201ENST00000610161 430 ntBASIC6.51□□□□□ -1.37
RETP07949 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
RETP07949 AC126175.1-201ENST00000617041 758 ntBASIC6.51□□□□□ -1.37
RETP07949 FAM27E2-201ENST00000619668 403 ntBASIC6.51□□□□□ -1.37
RETP07949 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RETP07949 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.51□□□□□ -1.37
RETP07949 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.51□□□□□ -1.37
RETP07949 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.51□□□□□ -1.37
RETP07949 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RETP07949 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
RETP07949 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RETP07949 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.5□□□□□ -1.37
RETP07949 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RETP07949 AC005618.1-201ENST00000606901 3148 ntBASIC6.5□□□□□ -1.37
RETP07949 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
RETP07949 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
RETP07949 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
RETP07949 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.5□□□□□ -1.37
RETP07949 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RETP07949 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.5□□□□□ -1.37
RETP07949 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RETP07949 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.5□□□□□ -1.37
RETP07949 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.5□□□□□ -1.37
RETP07949 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RETP07949 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
RETP07949 TMSB4XP4-201ENST00000323496 618 ntBASIC6.5□□□□□ -1.37
RETP07949 SUGT1P2-201ENST00000379452 992 ntBASIC6.5□□□□□ -1.37
RETP07949 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RETP07949 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RETP07949 GTF3AP1-201ENST00000416942 1004 ntBASIC6.5□□□□□ -1.37
RETP07949 CDY8P-201ENST00000428380 1279 ntBASIC6.5□□□□□ -1.37
RETP07949 IGLV3-4-201ENST00000432300 244 ntBASIC6.5□□□□□ -1.37
RETP07949 DNAJC19P5-201ENST00000443295 316 ntBASIC6.5□□□□□ -1.37
RETP07949 CXCR2P1-202ENST00000443392 1074 ntBASIC6.5□□□□□ -1.37
RETP07949 CDY20P-201ENST00000447528 1279 ntBASIC6.5□□□□□ -1.37
RETP07949 AC133965.1-201ENST00000452984 354 ntBASIC6.5□□□□□ -1.37
RETP07949 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
RETP07949 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.5□□□□□ -1.37
RETP07949 OR7E99P-201ENST00000505750 922 ntBASIC6.5□□□□□ -1.37
RETP07949 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.5□□□□□ -1.37
RETP07949 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RETP07949 IGKV3D-25-201ENST00000519599 235 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms