Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PDGFBP01127 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.44□□□□□ -1.38
PDGFBP01127 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.44□□□□□ -1.38
PDGFBP01127 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.44□□□□□ -1.38
PDGFBP01127 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.44□□□□□ -1.38
PDGFBP01127 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.44□□□□□ -1.38
PDGFBP01127 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
PDGFBP01127 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.44□□□□□ -1.38
PDGFBP01127 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PDGFBP01127 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.44□□□□□ -1.38
PDGFBP01127 MIR585-201ENST00000384887 94 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 RANP7-201ENST00000418085 644 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.44□□□□□ -1.38
PDGFBP01127 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 RPS7P14-201ENST00000426405 583 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 CRYGGP-201ENST00000443337 145 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 AC022206.1-201ENST00000495947 347 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.44□□□□□ -1.38
PDGFBP01127 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.44□□□□□ -1.38
PDGFBP01127 AC122713.1-201ENST00000518368 1015 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.44□□□□□ -1.38
PDGFBP01127 AP005119.1-201ENST00000580956 292 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 AC090236.2-201ENST00000587933 1101 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 AP001823.1-201ENST00000604056 1003 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.44□□□□□ -1.38
PDGFBP01127 AC006924.1-201ENST00000610750 559 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.44□□□□□ -1.38
PDGFBP01127 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC6.44□□□□□ -1.38
PDGFBP01127 AC090220.1-201ENST00000593078 1699 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 AL136984.1-201ENST00000607611 1893 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 AC241584.2-201ENST00000637142 2090 ntBASIC6.44□□□□□ -1.38
PDGFBP01127 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PDGFBP01127 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.44□□□□□ -1.38
PDGFBP01127 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.44□□□□□ -1.38
PDGFBP01127 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.44□□□□□ -1.38
PDGFBP01127 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
PDGFBP01127 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFBP01127 AC093278.2-201ENST00000564956 2485 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFBP01127 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFBP01127 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFBP01127 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.43□□□□□ -1.38
PDGFBP01127 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFBP01127 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
PDGFBP01127 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFBP01127 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFBP01127 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
PDGFBP01127 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFBP01127 RNU1-150P-201ENST00000362491 162 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 RN7SKP161-201ENST00000411110 305 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 SDHDP6-201ENST00000414693 480 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 AL035660.1-201ENST00000422041 222 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFBP01127 AK3P5-201ENST00000432033 519 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFBP01127 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFBP01127 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFBP01127 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.43□□□□□ -1.38
PDGFBP01127 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFBP01127 AC115223.1-201ENST00000466377 870 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 NDUFA5P12-201ENST00000503796 343 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.43□□□□□ -1.38
PDGFBP01127 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.43□□□□□ -1.38
PDGFBP01127 AP004607.6-201ENST00000525033 1202 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFBP01127 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFBP01127 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFBP01127 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFBP01127 ZNF322P1-201ENST00000568013 1209 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFBP01127 AC106785.4-201ENST00000569492 412 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 GTF2IP6-201ENST00000583143 541 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFBP01127 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 AC022106.1-201ENST00000612834 766 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.43□□□□□ -1.38
PDGFBP01127 AC096708.4-201ENST00000620563 552 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 AL136228.1-201ENST00000622221 319 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFBP01127 AC132825.8-201ENST00000640783 297 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms