Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.86□□□□□ -1.47
SSX4O60224 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SSX4O60224 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 RN7SKP237-201ENST00000364663 301 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AC083799.1-201ENST00000366451 910 ntBASIC5.86□□□□□ -1.47
SSX4O60224 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SSX4O60224 RNU6-891P-201ENST00000384280 111 ntBASIC5.86□□□□□ -1.47
SSX4O60224 SNORA11.3-201ENST00000408471 128 ntBASIC5.86□□□□□ -1.47
SSX4O60224 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.86□□□□□ -1.47
SSX4O60224 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX4O60224 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SSX4O60224 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SSX4O60224 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX4O60224 HMGN1P8-201ENST00000463578 288 ntBASIC5.86□□□□□ -1.47
SSX4O60224 RPS7P10-201ENST00000464254 603 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.86□□□□□ -1.47
SSX4O60224 AC117395.1-201ENST00000487390 403 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX4O60224 AC021220.1-201ENST00000507445 630 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX4O60224 KCTD9P6-201ENST00000522306 950 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AP001000.1-201ENST00000526843 742 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AP005639.1-201ENST00000526939 192 ntBASIC5.86□□□□□ -1.47
SSX4O60224 MTND2P17-201ENST00000550281 688 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX4O60224 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX4O60224 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX4O60224 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX4O60224 VN1R81P-201ENST00000602085 372 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AL078623.1-201ENST00000602702 907 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AC091768.1-201ENST00000609258 930 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AL008582.1-201ENST00000609612 442 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AL031658.2-201ENST00000616850 651 ntBASIC5.86□□□□□ -1.47
SSX4O60224 SNORA11.6-201ENST00000619030 128 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AC012653.2-201ENST00000621880 420 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AL353684.1-201ENST00000622677 1120 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AC068213.1-201ENST00000625124 226 ntBASIC5.86□□□□□ -1.47
SSX4O60224 AC011471.4-201ENST00000638271 216 ntBASIC5.86□□□□□ -1.47
SSX4O60224 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX4O60224 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX4O60224 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SSX4O60224 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX4O60224 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
SSX4O60224 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 WDR95P-201ENST00000425638 1542 ntBASIC5.85□□□□□ -1.47
SSX4O60224 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.85□□□□□ -1.47
SSX4O60224 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SSX4O60224 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 PPBPP2-201ENST00000513150 1362 ntBASIC5.85□□□□□ -1.47
SSX4O60224 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SSX4O60224 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.85□□□□□ -1.47
SSX4O60224 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SSX4O60224 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SSX4O60224 FAM32BP-201ENST00000344033 333 ntBASIC5.85□□□□□ -1.47
SSX4O60224 RNA5SP308-201ENST00000362532 115 ntBASIC5.85□□□□□ -1.47
SSX4O60224 RNU1-5P-201ENST00000362684 144 ntBASIC5.85□□□□□ -1.47
SSX4O60224 RNA5SP65-201ENST00000363166 119 ntBASIC5.85□□□□□ -1.47
SSX4O60224 RN7SKP250-201ENST00000363924 321 ntBASIC5.85□□□□□ -1.47
SSX4O60224 RN7SKP187-201ENST00000365536 330 ntBASIC5.85□□□□□ -1.47
SSX4O60224 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.85□□□□□ -1.47
SSX4O60224 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 LCN1P2-201ENST00000372030 223 ntBASIC5.85□□□□□ -1.47
SSX4O60224 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SSX4O60224 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.85□□□□□ -1.47
SSX4O60224 AC021876.1-201ENST00000425959 359 ntBASIC5.85□□□□□ -1.47
SSX4O60224 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX4O60224 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.85□□□□□ -1.47
SSX4O60224 AC009237.1-201ENST00000442127 744 ntBASIC5.85□□□□□ -1.47
SSX4O60224 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX4O60224 AC073072.2-201ENST00000447425 348 ntBASIC5.85□□□□□ -1.47
SSX4O60224 RN7SL216P-201ENST00000471607 298 ntBASIC5.85□□□□□ -1.47
SSX4O60224 RPS3AP49-201ENST00000472161 790 ntBASIC5.85□□□□□ -1.47
SSX4O60224 RN7SL654P-201ENST00000479178 292 ntBASIC5.85□□□□□ -1.47
SSX4O60224 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.85□□□□□ -1.47
SSX4O60224 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.85□□□□□ -1.47
SSX4O60224 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.85□□□□□ -1.47
SSX4O60224 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX4O60224 IGLV3-6-201ENST00000523937 250 ntBASIC5.85□□□□□ -1.47
SSX4O60224 OR9G2P-201ENST00000533326 880 ntBASIC5.85□□□□□ -1.47
SSX4O60224 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX4O60224 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.85□□□□□ -1.47
SSX4O60224 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.85□□□□□ -1.47
SSX4O60224 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX4O60224 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.85□□□□□ -1.47
SSX4O60224 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms