Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
UPK1AO00322 AC245291.3-201ENST00000443400 292 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 MORF4-201ENST00000447135 971 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.87□□□□□ -1.47
UPK1AO00322 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.87□□□□□ -1.47
UPK1AO00322 SNRPCP11-201ENST00000492453 205 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 AC090058.1-201ENST00000498788 435 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 NACAP5-201ENST00000509863 636 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.87□□□□□ -1.47
UPK1AO00322 AC093816.1-201ENST00000515076 913 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.87□□□□□ -1.47
UPK1AO00322 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.87□□□□□ -1.47
UPK1AO00322 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.87□□□□□ -1.47
UPK1AO00322 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.87□□□□□ -1.47
UPK1AO00322 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 AC027229.1-201ENST00000583887 253 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.87□□□□□ -1.47
UPK1AO00322 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.87□□□□□ -1.47
UPK1AO00322 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.87□□□□□ -1.47
UPK1AO00322 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.87□□□□□ -1.47
UPK1AO00322 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.87□□□□□ -1.47
UPK1AO00322 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.87□□□□□ -1.47
UPK1AO00322 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.87□□□□□ -1.47
UPK1AO00322 SNORA74.4-201ENST00000607595 199 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.87□□□□□ -1.47
UPK1AO00322 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.87□□□□□ -1.47
UPK1AO00322 AC003992.1-201ENST00000635364 557 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 AP001541.1-201ENST00000623322 1904 ntBASIC5.87□□□□□ -1.47
UPK1AO00322 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.87□□□□□ -1.47
UPK1AO00322 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.87□□□□□ -1.47
UPK1AO00322 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UPK1AO00322 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 AC010401.2-201ENST00000575137 4934 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
UPK1AO00322 OFD1P17-201ENST00000437639 3018 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.86□□□□□ -1.47
UPK1AO00322 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.86□□□□□ -1.47
UPK1AO00322 CASC19-246ENST00000641625 1606 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
UPK1AO00322 RNA5SP77-201ENST00000365394 120 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 AL157702.1-201ENST00000398764 426 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 AL096800.1-201ENST00000405326 893 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.86□□□□□ -1.47
UPK1AO00322 AL590399.2-201ENST00000427536 309 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 RPL12P16-201ENST00000431098 498 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 AL365220.1-201ENST00000432923 399 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 RPL12P49-201ENST00000441100 121 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.86□□□□□ -1.47
UPK1AO00322 AC234771.2-201ENST00000445718 597 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 RPS18P1-201ENST00000447840 458 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 AC099670.1-201ENST00000455141 783 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 RARRES2P3-201ENST00000457739 473 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 RN7SL326P-201ENST00000477493 296 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC5.86□□□□□ -1.47
UPK1AO00322 CYP4F27P-201ENST00000514557 494 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
UPK1AO00322 RNA5SP400-201ENST00000517155 111 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.86□□□□□ -1.47
UPK1AO00322 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.86□□□□□ -1.47
UPK1AO00322 CYCSP25-201ENST00000525280 316 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.86□□□□□ -1.47
UPK1AO00322 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.86□□□□□ -1.47
UPK1AO00322 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.86□□□□□ -1.47
UPK1AO00322 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.86□□□□□ -1.47
UPK1AO00322 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.86□□□□□ -1.47
UPK1AO00322 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.86□□□□□ -1.47
UPK1AO00322 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.86□□□□□ -1.47
UPK1AO00322 NPIPB1P-202ENST00000588786 828 ntBASIC5.86□□□□□ -1.47
UPK1AO00322 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.86□□□□□ -1.47
UPK1AO00322 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.86□□□□□ -1.47
UPK1AO00322 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
UPK1AO00322 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
UPK1AO00322 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
UPK1AO00322 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
UPK1AO00322 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
UPK1AO00322 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UPK1AO00322 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.86□□□□□ -1.47
UPK1AO00322 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms