Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC022784.5-201ENST00000522241 437 ntBASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 AC024901.1-201ENST00000535764 718 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 AC005479.1-201ENST00000554629 451 ntBASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 AL109936.2-201ENST00000605350 650 ntBASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 AC113361.1-201ENST00000606683 543 ntBASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 Z93930.3-201ENST00000607919 749 ntBASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 MIR6872-201ENST00000612981 62 ntBASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 ELMO2P1-202ENST00000614283 794 ntBASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 AP002967.1-201ENST00000624203 539 ntBASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 AC114546.4-201ENST00000624413 369 ntBASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 OR5AC4P-202ENST00000642086 985 ntBASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 DLEU2L-201ENST00000371086 3555 ntBASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
HMGB1P1B2RPK0 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC011455.2-201ENST00000599320 3336 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC244453.4-201ENST00000419150 388 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 CYP4F30P-202ENST00000420048 405 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC007562.1-201ENST00000421819 517 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AL356806.1-201ENST00000422524 916 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 WDR95P-201ENST00000425638 1542 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC000362.1-201ENST00000433725 425 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC108039.2-201ENST00000440214 359 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC023274.2-201ENST00000445264 521 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC097463.1-201ENST00000447288 481 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AL445687.2-201ENST00000458156 728 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AL022319.1-201ENST00000458183 1167 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 RNU6-775P-201ENST00000459318 96 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC008410.1-201ENST00000483777 339 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 RNA5SP278-201ENST00000517055 102 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 UBE2CP4-201ENST00000561405 535 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC074141.1-201ENST00000588129 2995 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AC073333.2-201ENST00000603589 769 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 AP002512.4-202ENST00000641599 4530 ntBASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGB1P1B2RPK0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms