Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AC016908.1-201ENST00000442571 1219 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 BMS1P10-201ENST00000443754 1120 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 TUBB4BP2-201ENST00000454125 798 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 PSAT1P4-201ENST00000466500 526 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 RN7SL586P-201ENST00000479137 296 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 CCDC58-205ENST00000479899 545 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 PFN2-209ENST00000481275 560 ntTSL 4 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 OR9N1P-201ENST00000491296 333 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 RN7SL306P-201ENST00000492941 296 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 RN7SL34P-201ENST00000497296 270 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 HMGB3P16-201ENST00000508037 287 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AC106774.1-201ENST00000515105 321 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 RN7SKP288-201ENST00000516227 268 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AF186190.1-201ENST00000517470 480 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 TRIQK-213ENST00000521617 774 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AC044839.4-201ENST00000534128 469 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 MTCYBP13-201ENST00000578634 1093 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 RN7SL176P-201ENST00000580352 264 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AP005202.3-201ENST00000582033 567 ntTSL 4 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 MIR4470-201ENST00000583453 72 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AC022149.1-201ENST00000596032 609 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AC068768.2-201ENST00000602352 343 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 NQO2-209ENST00000606474 470 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 SNORD91B-202ENST00000608459 222 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 Metazoa_SRP.101-201ENST00000611704 303 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 PPARGC1A-216ENST00000612355 936 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AL627230.8-201ENST00000613335 202 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 uc_338.31-201ENST00000615595 186 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 PPARGC1A-218ENST00000617484 1026 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 Metazoa_SRP.62-201ENST00000619972 268 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AC005383.1-201ENST00000622689 534 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AD000813.1-201ENST00000624007 832 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AL355480.3-201ENST00000630128 96 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 TLK1P1-201ENST00000456760 2440 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AP002800.1-201ENST00000624982 2225 ntBASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01558Q9Y6Z2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 THAP12P8-201ENST00000447914 2115 ntBASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 EEF1A1P33-201ENST00000554413 1362 ntBASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 OR52B5P-203ENST00000641694 1313 ntBASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 RNA5SP382-201ENST00000363355 112 ntBASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 AC013442.1-201ENST00000397347 228 ntBASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 CD160-203ENST00000401557 705 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 AL121834.1-202ENST00000404494 277 ntBASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 SNORA79B-201ENST00000410557 148 ntBASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 RPLP1P10-201ENST00000413972 339 ntBASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 PTCD2P2-201ENST00000415579 1095 ntBASIC3.04□□□□□ -1.92
LINC01558Q9Y6Z2 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms