Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 RPA2P3-201ENST00000533268 770 ntBASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 MIR378C-201ENST00000578683 81 ntBASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 ACTG1P22-201ENST00000603793 1099 ntBASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 RPL12P48-201ENST00000605620 304 ntBASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 SNORD96A-201ENST00000606577 79 ntBASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 AC012510.1-201ENST00000607946 759 ntBASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 AC016252.1-201ENST00000609721 474 ntBASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 AC006924.1-201ENST00000610750 559 ntBASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 AC018628.1-201ENST00000624147 3819 ntBASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 AP000550.3-201ENST00000637734 379 ntBASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RCL1Q9Y2P8 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 OR5M2P-202ENST00000641241 4242 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 SNORA30B-201ENST00000365319 129 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AL445238.1-204ENST00000400311 463 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 CBX1P3-201ENST00000413296 527 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 PHBP4-201ENST00000437447 837 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 KRT8P51-201ENST00000438938 274 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 ST13P12-201ENST00000508958 1094 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 MIR4800-201ENST00000537353 80 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AC006120.1-201ENST00000579375 546 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 MIR5682-201ENST00000584864 76 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AC020916.2-201ENST00000591242 360 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AC025857.2-201ENST00000602711 238 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AC019257.2-201ENST00000605539 497 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 MIR6726-201ENST00000613751 61 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 MIR6085-201ENST00000618314 110 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AC005858.3-201ENST00000624756 589 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AC109446.4-201ENST00000623235 2755 ntBASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
RCL1Q9Y2P8 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 CASC19-260ENST00000641828 2001 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 AC083837.1-201ENST00000565297 2994 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 AC092451.3-201ENST00000625067 1343 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 RN7SKP1-201ENST00000365525 307 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms