Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AC073488.6-201ENST00000632293 754 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AC140479.2-201ENST00000421567 3130 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AC010168.2-201ENST00000562691 5428 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 AL139384.2-201ENST00000613809 3590 ntBASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM9SF3Q9HD45 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 AC005618.1-201ENST00000606901 3148 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 AL591848.4-201ENST00000567832 3472 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 AL049697.3-201ENST00000406493 982 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 AL139805.1-201ENST00000407837 289 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 DHFRP2-201ENST00000414224 547 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 RPL7AP14-201ENST00000424041 802 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 NAP1L4P2-201ENST00000425958 899 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 MRPS21P3-201ENST00000436696 262 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 OR52I1-201ENST00000450052 1050 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 AC117395.1-201ENST00000487390 403 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 AC131392.1-201ENST00000506490 633 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 SNORA81.2-201ENST00000516868 170 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 AC009879.1-201ENST00000520029 839 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 AL138895.2-201ENST00000603019 178 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 AC023245.2-201ENST00000530760 2978 ntBASIC6.45□□□□□ -1.38
TM9SF3Q9HD45 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 AC096537.2-201ENST00000413707 714 ntBASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 RPL23AP18-201ENST00000416139 468 ntBASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 EMC3-AS1-205ENST00000438698 534 ntBASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 CXCR2P1-202ENST00000443392 1074 ntBASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 AP002453.1-201ENST00000492327 668 ntBASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 OR4A13P-201ENST00000529316 942 ntBASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 AC090115.2-201ENST00000548060 883 ntBASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 HMGN2P47-201ENST00000559378 272 ntBASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 PARP4P1-201ENST00000435945 2337 ntBASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms