Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 RNA5SP260-201ENST00000363849 111 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 Y_RNA.436-201ENST00000384097 102 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 MIR541-201ENST00000401360 84 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AL139100.1-201ENST00000408001 498 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 RPL23AP18-201ENST00000416139 468 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 PPIAP23-201ENST00000420099 497 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AL390840.1-201ENST00000420303 988 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 FO393414.1-201ENST00000428697 1184 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC073900.1-201ENST00000429766 776 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 RPS26P4-201ENST00000431743 355 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 FABP5P3-201ENST00000437960 408 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 MED6P1-201ENST00000439659 713 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 GTF2F2P2-201ENST00000445825 721 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 TREML3P-201ENST00000457327 501 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 RPL21P18-201ENST00000469899 480 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AL928654.1-201ENST00000476081 354 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 SNORA70D-201ENST00000578836 135 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 NBR2-204ENST00000587322 63 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 CYCSP1-201ENST00000604815 315 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC012510.1-201ENST00000607946 759 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 MIR8082-201ENST00000612488 81 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC083865.1-201ENST00000636634 831 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC099654.3-201ENST00000447087 1546 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 LINC01616-201ENST00000561816 2280 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AL669831.5-218ENST00000591702 1873 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 AC078880.4-201ENST00000617627 1749 ntBASIC7.3□□□□□ -1.24
FOXP3Q9BZS1 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 AC017079.1-201ENST00000333650 415 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 RN7SKP107-201ENST00000364157 290 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 ARMCX7P-201ENST00000372828 562 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 SNORA11D-201ENST00000408548 128 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 SNORA11E-201ENST00000408778 128 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 TRIM60P17-201ENST00000415181 719 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 MFSD13B-201ENST00000420133 1290 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 AF274573.1-201ENST00000430535 494 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 RPS7P2-201ENST00000435134 607 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 ARF4P4-201ENST00000439608 520 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 ELOCP30-201ENST00000447108 299 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 SLAMF6P1-201ENST00000451067 602 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 RN7SL688P-201ENST00000471754 275 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 ANK3-213ENST00000486349 493 ntTSL 2 BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 AC122714.1-201ENST00000502510 459 ntBASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
FOXP3Q9BZS1 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms