Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL021368.3-201ENST00000607119 578 ntBASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 AC068726.1-201ENST00000610993 341 ntBASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 AC008691.1-209ENST00000642094 814 ntBASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 TMCC1P1-201ENST00000518897 1980 ntBASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 AC009831.5-201ENST00000624000 3189 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 SNORA64.3-201ENST00000365647 134 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 AL360271.1-201ENST00000395679 510 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 AC017035.1-201ENST00000411999 1115 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 RPS21P8-201ENST00000413365 247 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 RPSAP32-201ENST00000432681 526 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 AC104339.1-201ENST00000465478 348 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 RN7SL413P-201ENST00000482700 297 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 RNA5SP418-201ENST00000515951 117 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 SNORA81.2-201ENST00000516868 170 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 RPL41P2-201ENST00000544920 409 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 RPL3P13-201ENST00000550415 216 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 RN7SL371P-201ENST00000578099 267 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 uc_338.29-201ENST00000615099 168 ntBASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UPF3BQ9BZI7 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AL121768.1-201ENST00000613917 2544 ntBASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AL355377.1-201ENST00000621125 1653 ntBASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 OR11H13P-201ENST00000359695 979 ntBASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 RN7SKP237-201ENST00000364663 301 ntBASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 RNU11-6P-201ENST00000391127 133 ntBASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AL445238.1-204ENST00000400311 463 ntBASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AC234771.2-201ENST00000445718 597 ntBASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 RN7SL214P-201ENST00000487317 265 ntBASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AC011411.1-201ENST00000509592 876 ntBASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AC022400.9-201ENST00000623633 273 ntBASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 AL136984.1-201ENST00000607611 1893 ntBASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
UPF3BQ9BZI7 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 AL451142.1-201ENST00000375867 775 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 MIR433-201ENST00000384837 93 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 AC003045.1-201ENST00000398779 713 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms