Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 FAM27E3-202ENST00000614611 340 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 MIR6883-201ENST00000614952 78 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC027506.1-201ENST00000621395 198 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 CIR1P2-201ENST00000514821 1342 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC011503.2-201ENST00000594230 1500 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.21□□□□□ -1.25
TRIM55Q9BYV6 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
TRIM55Q9BYV6 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM55Q9BYV6 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.21□□□□□ -1.25
TRIM55Q9BYV6 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC7.21□□□□□ -1.25
TRIM55Q9BYV6 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM55Q9BYV6 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.21□□□□□ -1.25
TRIM55Q9BYV6 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.21□□□□□ -1.25
TRIM55Q9BYV6 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM55Q9BYV6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM55Q9BYV6 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM55Q9BYV6 AC020978.6-201ENST00000571197 3177 ntBASIC7.21□□□□□ -1.25
TRIM55Q9BYV6 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.21□□□□□ -1.25
TRIM55Q9BYV6 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 KARSP2-201ENST00000415696 1639 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC090771.1-201ENST00000585803 1618 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 MTCO2P31-201ENST00000402702 684 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 RPL7P27-201ENST00000403775 720 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 CR769776.1-201ENST00000441254 787 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AL591379.2-201ENST00000450223 397 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 GTF2IP12-201ENST00000456547 356 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC005017.1-201ENST00000482002 490 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 CDH12P2-201ENST00000504393 298 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 RPL10P18-201ENST00000519384 309 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 COX6CP11-201ENST00000555293 229 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC044860.3-201ENST00000559957 368 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AP002906.1-201ENST00000603405 233 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AL513218.1-201ENST00000606527 391 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC004777.1-201ENST00000624317 287 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC129908.1-201ENST00000624553 648 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 PABPC1P8-201ENST00000452851 2086 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC091544.5-201ENST00000620192 3815 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 MAPK10-344ENST00000641718 3746 ntBASIC7.21□□□□□ -1.26
TRIM55Q9BYV6 AC017007.4-201ENST00000503353 1352 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms