Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.96□□□□□ -1.3
CDK5RAP1Q96SZ6 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AL132656.3-201ENST00000606384 1595 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 RPL24P4-201ENST00000326586 421 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 VN1R3-201ENST00000418822 919 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 BMP6P1-201ENST00000431230 679 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 RPL12P49-201ENST00000441100 121 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 TVP23CP1-201ENST00000450317 639 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AC093166.2-201ENST00000455969 1017 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 MTND4P2-201ENST00000507767 1203 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AC025768.1-201ENST00000510057 267 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 RN7SKP265-201ENST00000516448 223 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AP004607.6-201ENST00000525033 1202 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AC133794.1-201ENST00000602731 914 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AC080013.3-201ENST00000606839 578 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AC068787.1-201ENST00000623908 691 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 AL669831.5-218ENST00000591702 1873 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 PSMC1P6-201ENST00000477233 1319 ntBASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CDK5RAP1Q96SZ6 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC010329.1-201ENST00000593903 8328 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 RACGAP1P-201ENST00000550663 1879 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 ZNF658B-201ENST00000602828 3408 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC007012.2-201ENST00000623206 1676 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms