Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 RNU1-24P-201ENST00000364285 165 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 RN7SKP47-201ENST00000365347 328 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 FDPSP5-201ENST00000399474 1057 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 AL359694.1-201ENST00000403247 604 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AL139184.1-202ENST00000422303 222 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 NPM1P23-201ENST00000440193 849 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC078857.1-201ENST00000469870 667 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 AP003385.3-201ENST00000472498 287 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC068522.1-201ENST00000482895 345 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC106822.1-201ENST00000502647 526 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 RNA5SP473-201ENST00000516402 125 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC007068.2-201ENST00000543168 395 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC009729.1-201ENST00000548873 1133 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AL049838.1-201ENST00000563647 981 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC079148.1-201ENST00000565944 819 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC004808.1-201ENST00000627671 721 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC099654.8-201ENST00000637757 681 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 MTCO1P15-201ENST00000529569 1526 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AL645568.2-201ENST00000432815 1337 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF31Q96EP0 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.49□□□□□ -1.37
RNF31Q96EP0 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF31Q96EP0 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF31Q96EP0 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF31Q96EP0 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF31Q96EP0 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF31Q96EP0 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF31Q96EP0 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF31Q96EP0 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF31Q96EP0 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 AC069282.1-201ENST00000411911 526 ntBASIC6.49□□□□□ -1.37
RNF31Q96EP0 GTF2IP5-201ENST00000414608 731 ntBASIC6.49□□□□□ -1.37
RNF31Q96EP0 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 AL139158.1-201ENST00000424719 340 ntBASIC6.49□□□□□ -1.37
RNF31Q96EP0 UBE2D3P3-201ENST00000426992 425 ntBASIC6.49□□□□□ -1.37
RNF31Q96EP0 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 MRPL50P1-201ENST00000431951 384 ntBASIC6.49□□□□□ -1.37
RNF31Q96EP0 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 AL354714.5-201ENST00000450131 590 ntBASIC6.49□□□□□ -1.37
RNF31Q96EP0 MEF2AP1-201ENST00000454867 863 ntBASIC6.49□□□□□ -1.37
RNF31Q96EP0 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 RPS7P10-201ENST00000464254 603 ntBASIC6.49□□□□□ -1.37
RNF31Q96EP0 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF31Q96EP0 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 AC084851.2-201ENST00000530377 364 ntBASIC6.49□□□□□ -1.37
RNF31Q96EP0 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF31Q96EP0 AC027667.1-201ENST00000545814 304 ntBASIC6.49□□□□□ -1.37
RNF31Q96EP0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.49□□□□□ -1.37
RNF31Q96EP0 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF31Q96EP0 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF31Q96EP0 SNORD96A-201ENST00000606577 79 ntBASIC6.49□□□□□ -1.37
RNF31Q96EP0 AC009974.1-201ENST00000608881 455 ntBASIC6.49□□□□□ -1.37
RNF31Q96EP0 AC097641.3-201ENST00000613523 464 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms