Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC010240.2-201ENST00000445363 1205 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 HMGB1P7-201ENST00000450921 612 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 SNX18P24-201ENST00000505249 671 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 RNA5SP116-201ENST00000516132 98 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 AC084121.1-201ENST00000533882 835 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 MIR4301-201ENST00000577203 66 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 MIR4271-201ENST00000582451 67 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 AC027229.1-201ENST00000583887 253 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 OR7A8P-201ENST00000595427 913 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 AC073389.3-201ENST00000609434 935 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 AC018717.1-201ENST00000457712 1505 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.27□□□□□ -1.4
ECHDC3Q96DC8 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AC011369.2-201ENST00000624423 1567 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 RNA5SP110-201ENST00000362638 115 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 RN7SKP237-201ENST00000364663 301 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 MIR433-201ENST00000384837 93 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 RNA5SP431-201ENST00000410312 120 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AL354707.3-201ENST00000427308 331 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AC016908.1-201ENST00000442571 1219 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AP002453.1-201ENST00000492327 668 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 RPL37P23-201ENST00000492641 294 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 OR7E99P-201ENST00000505750 922 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AC090958.1-201ENST00000511122 351 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 MAST4-IT1-201ENST00000514241 658 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 RNA5SP434-201ENST00000516647 121 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AC027667.1-201ENST00000545814 304 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 GLYATL1P2-202ENST00000588046 902 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AC024589.2-201ENST00000605642 1294 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AC097641.3-201ENST00000613523 464 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 AC093829.1-201ENST00000506662 1618 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ECHDC3Q96DC8 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 AL359976.1-201ENST00000418655 3528 ntBASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 AC092692.1-201ENST00000623625 2595 ntBASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.26□□□□□ -1.41
ECHDC3Q96DC8 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms