Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 AL049634.1-201ENST00000453770 1720 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 AL731556.1-201ENST00000394628 3711 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.19□□□□□ -1.26
HPS3Q969F9 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 SNORD35A-201ENST00000363389 86 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.19□□□□□ -1.26
HPS3Q969F9 RNU6-152P-201ENST00000384037 107 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 RNU11-6P-201ENST00000391127 133 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 MIR1266-201ENST00000408125 84 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.19□□□□□ -1.26
HPS3Q969F9 AC097721.1-201ENST00000427150 1253 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 VN1R53P-201ENST00000429536 957 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC7.19□□□□□ -1.26
HPS3Q969F9 PSMD8P1-201ENST00000436275 769 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 RPL31P11-202ENST00000454082 372 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 RN7SL83P-201ENST00000468131 297 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 RPS4XP17-201ENST00000479057 754 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 AC074386.1-206ENST00000487102 761 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 H3F3AP3-201ENST00000497682 407 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 AC093870.1-201ENST00000506837 213 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 AC139713.1-202ENST00000512366 460 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 AC084337.1-201ENST00000524809 686 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.19□□□□□ -1.26
HPS3Q969F9 AP003049.1-201ENST00000529418 457 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC7.19□□□□□ -1.26
HPS3Q969F9 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.19□□□□□ -1.26
HPS3Q969F9 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.19□□□□□ -1.26
HPS3Q969F9 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.19□□□□□ -1.26
HPS3Q969F9 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.19□□□□□ -1.26
HPS3Q969F9 AC092718.4-201ENST00000566639 716 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.19□□□□□ -1.26
HPS3Q969F9 RN7SL208P-201ENST00000577964 296 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 AC024267.2-201ENST00000582737 417 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.19□□□□□ -1.26
HPS3Q969F9 AC114477.1-201ENST00000605097 605 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.19□□□□□ -1.26
HPS3Q969F9 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.19□□□□□ -1.26
HPS3Q969F9 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.19□□□□□ -1.26
HPS3Q969F9 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
HPS3Q969F9 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
HPS3Q969F9 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 SAGE3P-201ENST00000619800 1635 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 AL512283.1-201ENST00000606756 1384 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
HPS3Q969F9 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HPS3Q969F9 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
HPS3Q969F9 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
HPS3Q969F9 RNA5SP333-201ENST00000363466 118 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 RNA5SP334-201ENST00000364825 118 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 AC019178.1-201ENST00000392337 440 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.18□□□□□ -1.26
HPS3Q969F9 OOSP1-201ENST00000398992 1270 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.18□□□□□ -1.26
HPS3Q969F9 RPL36P18-201ENST00000419316 318 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 CYCSP52-201ENST00000422857 310 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.18□□□□□ -1.26
HPS3Q969F9 MRPS33P4-201ENST00000434892 317 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.18□□□□□ -1.26
HPS3Q969F9 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.18□□□□□ -1.26
HPS3Q969F9 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.18□□□□□ -1.26
HPS3Q969F9 COL11A2P1-205ENST00000441798 676 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 AL020997.1-201ENST00000446554 349 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.18□□□□□ -1.26
HPS3Q969F9 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.18□□□□□ -1.26
HPS3Q969F9 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.18□□□□□ -1.26
HPS3Q969F9 AC005000.1-201ENST00000536192 288 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.18□□□□□ -1.26
HPS3Q969F9 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.18□□□□□ -1.26
HPS3Q969F9 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
HPS3Q969F9 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.18□□□□□ -1.26
HPS3Q969F9 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.18□□□□□ -1.26
HPS3Q969F9 AL078623.1-201ENST00000602702 907 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.18□□□□□ -1.26
HPS3Q969F9 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.18□□□□□ -1.26
HPS3Q969F9 AL512506.1-201ENST00000613918 449 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
HPS3Q969F9 U1.41-201ENST00000617626 165 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 AC253576.2-201ENST00000618815 580 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 AC012254.5-201ENST00000623573 478 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.18□□□□□ -1.26
HPS3Q969F9 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HPS3Q969F9 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.18□□□□□ -1.26
HPS3Q969F9 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.18□□□□□ -1.26
HPS3Q969F9 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
HPS3Q969F9 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HPS3Q969F9 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.18□□□□□ -1.26
HPS3Q969F9 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HPS3Q969F9 AL929601.4-201ENST00000613011 1341 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms