Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.42□□□□□ -1.54
AP3S1Q92572 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.42□□□□□ -1.54
AP3S1Q92572 MIR665-201ENST00000635949 72 ntBASIC5.42□□□□□ -1.54
AP3S1Q92572 OR5AU1-204ENST00000641822 1197 ntBASIC5.42□□□□□ -1.54
AP3S1Q92572 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S1Q92572 AC116158.1-201ENST00000560231 2129 ntBASIC5.42□□□□□ -1.54
AP3S1Q92572 AC015689.2-201ENST00000528172 1738 ntBASIC5.42□□□□□ -1.54
AP3S1Q92572 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
AP3S1Q92572 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.42□□□□□ -1.54
AP3S1Q92572 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.42□□□□□ -1.54
AP3S1Q92572 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.42□□□□□ -1.54
AP3S1Q92572 RBPJP6-201ENST00000411556 1431 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP3S1Q92572 AL136984.1-201ENST00000607611 1893 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP3S1Q92572 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.41□□□□□ -1.54
AP3S1Q92572 AC005224.3-201ENST00000584683 2140 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
AP3S1Q92572 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
AP3S1Q92572 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.41□□□□□ -1.54
AP3S1Q92572 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP3S1Q92572 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.41□□□□□ -1.54
AP3S1Q92572 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP3S1Q92572 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP3S1Q92572 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
AP3S1Q92572 RNA5SP176-201ENST00000390956 110 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 RPL11P3-201ENST00000395256 523 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
AP3S1Q92572 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP3S1Q92572 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC5.41□□□□□ -1.54
AP3S1Q92572 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.41□□□□□ -1.54
AP3S1Q92572 AC093107.1-201ENST00000422772 609 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.41□□□□□ -1.54
AP3S1Q92572 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC5.41□□□□□ -1.54
AP3S1Q92572 AC138761.5-201ENST00000433967 325 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 RPL7AP71-201ENST00000451120 739 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.41□□□□□ -1.54
AP3S1Q92572 SNORA35.1-201ENST00000458908 128 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 AC073594.1-201ENST00000462065 364 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 RN7SL552P-201ENST00000462094 276 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 DEFB109A-201ENST00000482450 265 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 PDCL3P4-201ENST00000489621 720 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 AC105420.1-201ENST00000504389 582 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
AP3S1Q92572 TPM3P3-201ENST00000521343 354 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.41□□□□□ -1.54
AP3S1Q92572 SETP17-201ENST00000534163 817 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 AC007068.2-201ENST00000543168 395 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.41□□□□□ -1.54
AP3S1Q92572 AC084824.2-201ENST00000548906 345 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC5.41□□□□□ -1.54
AP3S1Q92572 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.41□□□□□ -1.54
AP3S1Q92572 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.41□□□□□ -1.54
AP3S1Q92572 AC010503.3-201ENST00000594355 540 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 DYNLL1P1-201ENST00000595442 269 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 AC139792.1-201ENST00000607051 647 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 MRPL57P3-201ENST00000619218 176 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 MTCO1P7-201ENST00000419523 1542 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP3S1Q92572 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP3S1Q92572 AL161756.3-201ENST00000641216 2071 ntBASIC5.41□□□□□ -1.54
AP3S1Q92572 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP3S1Q92572 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.41□□□□□ -1.54
AP3S1Q92572 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP3S1Q92572 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP3S1Q92572 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
AP3S1Q92572 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.41□□□□□ -1.54
AP3S1Q92572 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AP3S1Q92572 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP3S1Q92572 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP3S1Q92572 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AP3S1Q92572 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP3S1Q92572 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
AP3S1Q92572 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.4□□□□□ -1.54
AP3S1Q92572 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP3S1Q92572 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AP3S1Q92572 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP3S1Q92572 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AP3S1Q92572 RPLP1P10-201ENST00000413972 339 ntBASIC5.4□□□□□ -1.54
AP3S1Q92572 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.4□□□□□ -1.54
AP3S1Q92572 NPM1P18-201ENST00000434232 732 ntBASIC5.4□□□□□ -1.54
AP3S1Q92572 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.4□□□□□ -1.54
AP3S1Q92572 RSU1P1-201ENST00000453416 441 ntBASIC5.4□□□□□ -1.54
AP3S1Q92572 RPL7P17-201ENST00000470927 724 ntBASIC5.4□□□□□ -1.54
AP3S1Q92572 IGKV2D-38-201ENST00000518423 240 ntBASIC5.4□□□□□ -1.54
AP3S1Q92572 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.4□□□□□ -1.54
AP3S1Q92572 HIGD1AP9-201ENST00000550710 279 ntBASIC5.4□□□□□ -1.54
AP3S1Q92572 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC5.4□□□□□ -1.54
AP3S1Q92572 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.4□□□□□ -1.54
AP3S1Q92572 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC5.4□□□□□ -1.54
AP3S1Q92572 AL163952.1-202ENST00000569625 600 ntBASIC5.4□□□□□ -1.54
AP3S1Q92572 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.4□□□□□ -1.54
AP3S1Q92572 AC027216.1-201ENST00000577726 685 ntBASIC5.4□□□□□ -1.54
AP3S1Q92572 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.4□□□□□ -1.54
AP3S1Q92572 AC006115.2-201ENST00000596823 202 ntBASIC5.4□□□□□ -1.54
AP3S1Q92572 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.4□□□□□ -1.54
AP3S1Q92572 AC245052.7-201ENST00000601161 359 ntBASIC5.4□□□□□ -1.54
AP3S1Q92572 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.4□□□□□ -1.54
AP3S1Q92572 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms