Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.44
CLHC1Q8NHS4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.44
CLHC1Q8NHS4 AL121768.1-201ENST00000613917 2544 ntBASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 ICE2P1-201ENST00000512800 1849 ntBASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 RNU11-6P-201ENST00000391127 133 ntBASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AC026310.1-201ENST00000396004 378 ntBASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AP003385.1-201ENST00000426387 893 ntBASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 OR13K1P-201ENST00000444577 975 ntBASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 RN7SL714P-201ENST00000487050 298 ntBASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AC122714.1-201ENST00000502510 459 ntBASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 RNA5SP400-201ENST00000517155 111 ntBASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AL589863.1-201ENST00000595383 631 ntBASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 OR4G1P-202ENST00000641173 1788 ntBASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 DNM1P47-203ENST00000571780 12667 ntBASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 Z95114.1-201ENST00000624264 14574 ntBASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.02□□□□□ -1.45
CLHC1Q8NHS4 AC068769.1-201ENST00000474767 2426 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 AC125238.2-201ENST00000430003 1440 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 SMG1P5-202ENST00000529428 4219 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 SMG1P2-201ENST00000566127 4221 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 AL445238.1-204ENST00000400311 463 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 DPPA2P2-201ENST00000418220 897 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 AC007562.1-201ENST00000421819 517 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 DNAJC19P5-201ENST00000443295 316 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 AC023274.2-201ENST00000445264 521 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 SLC25A51P1-201ENST00000468432 871 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 RN7SL413P-201ENST00000482700 297 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 RNA5SP96-201ENST00000516041 107 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 LSM1P2-201ENST00000604911 322 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 AC006924.1-201ENST00000610750 559 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms