Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 NEPNP-201ENST00000404786 1371 ntBASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 AC027088.4-201ENST00000611559 1947 ntBASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 AC092017.2-201ENST00000427600 362 ntBASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 IGLV2-28-201ENST00000520681 304 ntBASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 AL356801.1-201ENST00000559320 294 ntBASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 AL136131.3-201ENST00000607600 188 ntBASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 AC022726.2-201ENST00000634673 547 ntBASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 CCNT2P1-201ENST00000423082 1315 ntBASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 CR383656.5-201ENST00000547616 1340 ntBASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 AC112243.1-201ENST00000623949 3851 ntBASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 SNORA70-201ENST00000384436 135 ntBASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 RPL35AP3-201ENST00000414680 288 ntBASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 RN7SL466P-201ENST00000497546 295 ntBASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 AC003992.1-201ENST00000635364 557 ntBASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 USP3-201ENST00000268049 5311 ntTSL 5 BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 AC119674.1-202ENST00000641333 1860 ntBASIC9.56□□□□□ -0.88
CFAP43Q8NDM7 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 Z93929.1-201ENST00000418200 1475 ntBASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 BPHL-201ENST00000380368 797 ntTSL 5 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 AL133445.1-201ENST00000467051 452 ntBASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 AC068870.2-201ENST00000620635 389 ntBASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 AL357562.1-201ENST00000624911 609 ntBASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 AC108693.1-201ENST00000496068 432 ntBASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC9.55□□□□□ -0.88
CFAP43Q8NDM7 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 TNPO1P2-201ENST00000426249 2665 ntBASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 AL359922.2-201ENST00000581788 3017 ntBASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 GNL2P1-201ENST00000451274 2190 ntBASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 AP001541.1-201ENST00000623322 1904 ntBASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 SNORA64.1-201ENST00000362600 132 ntBASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 RPL35AP31-201ENST00000418340 337 ntBASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 AC015977.1-201ENST00000418887 292 ntBASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 AC138866.2-201ENST00000508650 584 ntBASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms