Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL096712.1-201ENST00000614561 159 ntBASIC9.55□□□□□ -0.88
VPS8Q8N3P4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 AC022400.9-201ENST00000623633 273 ntBASIC9.55□□□□□ -0.88
VPS8Q8N3P4 AF287957.1-201ENST00000607368 1595 ntBASIC9.55□□□□□ -0.88
VPS8Q8N3P4 AC012254.3-201ENST00000591183 2117 ntBASIC9.55□□□□□ -0.88
VPS8Q8N3P4 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 BRD7P6-201ENST00000431406 1860 ntBASIC9.54□□□□□ -0.88
VPS8Q8N3P4 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 AC104162.1-201ENST00000430831 2382 ntBASIC9.54□□□□□ -0.88
VPS8Q8N3P4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 NDUFS5P5-201ENST00000437256 321 ntBASIC9.54□□□□□ -0.88
VPS8Q8N3P4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC9.54□□□□□ -0.88
VPS8Q8N3P4 AC114728.1-201ENST00000488289 483 ntBASIC9.54□□□□□ -0.88
VPS8Q8N3P4 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 NDUFA5P11-201ENST00000567995 343 ntBASIC9.54□□□□□ -0.88
VPS8Q8N3P4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 AC092681.3-201ENST00000609463 678 ntBASIC9.54□□□□□ -0.88
VPS8Q8N3P4 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
VPS8Q8N3P4 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 HNRNPA1P54-201ENST00000411857 9714 ntBASIC9.53□□□□□ -0.88
VPS8Q8N3P4 DOCK11P1-201ENST00000553480 5932 ntBASIC9.53□□□□□ -0.88
VPS8Q8N3P4 RNA5SP211-201ENST00000365516 117 ntBASIC9.53□□□□□ -0.88
VPS8Q8N3P4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 AC116036.1-201ENST00000412199 367 ntBASIC9.53□□□□□ -0.88
VPS8Q8N3P4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 PCBP2P1-201ENST00000437262 977 ntBASIC9.53□□□□□ -0.88
VPS8Q8N3P4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 AC104164.1-201ENST00000460282 590 ntBASIC9.53□□□□□ -0.88
VPS8Q8N3P4 AC092865.4-201ENST00000477936 615 ntBASIC9.53□□□□□ -0.88
VPS8Q8N3P4 RNA5SP438-201ENST00000516561 112 ntBASIC9.53□□□□□ -0.88
VPS8Q8N3P4 AP003396.4-201ENST00000527574 265 ntBASIC9.53□□□□□ -0.88
VPS8Q8N3P4 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 AL136097.3-201ENST00000611097 505 ntBASIC9.53□□□□□ -0.88
VPS8Q8N3P4 AC245014.3-201ENST00000618589 347 ntBASIC9.53□□□□□ -0.88
VPS8Q8N3P4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC9.53□□□□□ -0.88
VPS8Q8N3P4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC9.52□□□□□ -0.88
VPS8Q8N3P4 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
VPS8Q8N3P4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.88
VPS8Q8N3P4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
VPS8Q8N3P4 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 CDY8P-201ENST00000428380 1279 ntBASIC9.52□□□□□ -0.89
VPS8Q8N3P4 BMS1P10-201ENST00000443754 1120 ntBASIC9.52□□□□□ -0.89
VPS8Q8N3P4 CDY20P-201ENST00000447528 1279 ntBASIC9.52□□□□□ -0.89
VPS8Q8N3P4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 OR7E158P-201ENST00000524483 910 ntBASIC9.52□□□□□ -0.89
VPS8Q8N3P4 TRIM51DP-201ENST00000529746 596 ntBASIC9.52□□□□□ -0.89
VPS8Q8N3P4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 AL138895.2-201ENST00000603019 178 ntBASIC9.52□□□□□ -0.89
VPS8Q8N3P4 RPL12P48-201ENST00000605620 304 ntBASIC9.52□□□□□ -0.89
VPS8Q8N3P4 AL136131.3-201ENST00000607600 188 ntBASIC9.52□□□□□ -0.89
VPS8Q8N3P4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
VPS8Q8N3P4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms