Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL512637.1-201ENST00000439523 1231 ntBASIC7.61□□□□□ -1.19
RHBDL3P58872 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.61□□□□□ -1.19
RHBDL3P58872 RPL31P53-201ENST00000457065 348 ntBASIC7.61□□□□□ -1.19
RHBDL3P58872 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.61□□□□□ -1.19
RHBDL3P58872 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.61□□□□□ -1.19
RHBDL3P58872 AP002453.1-201ENST00000492327 668 ntBASIC7.61□□□□□ -1.19
RHBDL3P58872 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.61□□□□□ -1.19
RHBDL3P58872 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.61□□□□□ -1.19
RHBDL3P58872 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.61□□□□□ -1.19
RHBDL3P58872 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.61□□□□□ -1.19
RHBDL3P58872 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.61□□□□□ -1.19
RHBDL3P58872 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.61□□□□□ -1.19
RHBDL3P58872 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
RHBDL3P58872 MRPS21P8-201ENST00000569196 235 ntBASIC7.61□□□□□ -1.19
RHBDL3P58872 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.61□□□□□ -1.19
RHBDL3P58872 FAM60CP-201ENST00000591086 664 ntBASIC7.61□□□□□ -1.19
RHBDL3P58872 AC005229.3-201ENST00000603438 323 ntBASIC7.61□□□□□ -1.19
RHBDL3P58872 AC108865.2-201ENST00000606881 432 ntBASIC7.61□□□□□ -1.19
RHBDL3P58872 SNORA74.4-201ENST00000607595 199 ntBASIC7.61□□□□□ -1.19
RHBDL3P58872 AC015982.1-201ENST00000608113 465 ntBASIC7.61□□□□□ -1.19
RHBDL3P58872 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 AC011455.2-201ENST00000599320 3336 ntBASIC7.61□□□□□ -1.19
RHBDL3P58872 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.61□□□□□ -1.19
RHBDL3P58872 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
RHBDL3P58872 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RHBDL3P58872 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RHBDL3P58872 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.6□□□□□ -1.19
RHBDL3P58872 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
RHBDL3P58872 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.6□□□□□ -1.19
RHBDL3P58872 HYDIN2-203ENST00000614586 13885 ntBASIC7.6□□□□□ -1.19
RHBDL3P58872 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.6□□□□□ -1.19
RHBDL3P58872 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.6□□□□□ -1.19
RHBDL3P58872 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RHBDL3P58872 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
RHBDL3P58872 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RHBDL3P58872 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RHBDL3P58872 RNA5SP346-201ENST00000363541 121 ntBASIC7.6□□□□□ -1.19
RHBDL3P58872 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.6□□□□□ -1.19
RHBDL3P58872 RCC2P2-201ENST00000422174 918 ntBASIC7.6□□□□□ -1.19
RHBDL3P58872 AL389925.1-201ENST00000432257 728 ntBASIC7.6□□□□□ -1.19
RHBDL3P58872 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC7.6□□□□□ -1.19
RHBDL3P58872 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.6□□□□□ -1.19
RHBDL3P58872 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.6□□□□□ -1.19
RHBDL3P58872 AC097463.1-201ENST00000447288 481 ntBASIC7.6□□□□□ -1.19
RHBDL3P58872 AC016724.1-201ENST00000453215 421 ntBASIC7.6□□□□□ -1.19
RHBDL3P58872 AC002075.1-201ENST00000457396 676 ntBASIC7.6□□□□□ -1.19
RHBDL3P58872 RBBP4P1-201ENST00000502424 1276 ntBASIC7.6□□□□□ -1.19
RHBDL3P58872 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.6□□□□□ -1.19
RHBDL3P58872 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC7.6□□□□□ -1.19
RHBDL3P58872 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.6□□□□□ -1.19
RHBDL3P58872 MEG8-217ENST00000556637 924 ntTSL 5 BASIC7.6□□□□□ -1.19
RHBDL3P58872 AC067805.1-201ENST00000559344 470 ntBASIC7.6□□□□□ -1.19
RHBDL3P58872 HMGN2P47-201ENST00000559378 272 ntBASIC7.6□□□□□ -1.19
RHBDL3P58872 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.6□□□□□ -1.19
RHBDL3P58872 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.6□□□□□ -1.19
RHBDL3P58872 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.6□□□□□ -1.19
RHBDL3P58872 AL365181.4-201ENST00000609800 547 ntBASIC7.6□□□□□ -1.19
RHBDL3P58872 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.6□□□□□ -1.19
RHBDL3P58872 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RHBDL3P58872 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RHBDL3P58872 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RHBDL3P58872 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RHBDL3P58872 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.6□□□□□ -1.19
RHBDL3P58872 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
RHBDL3P58872 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RHBDL3P58872 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RHBDL3P58872 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.59□□□□□ -1.19
RHBDL3P58872 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.59□□□□□ -1.19
RHBDL3P58872 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RHBDL3P58872 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.59□□□□□ -1.19
RHBDL3P58872 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.59□□□□□ -1.19
RHBDL3P58872 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.59□□□□□ -1.19
RHBDL3P58872 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.59□□□□□ -1.19
RHBDL3P58872 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
RHBDL3P58872 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.59□□□□□ -1.19
RHBDL3P58872 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.59□□□□□ -1.19
RHBDL3P58872 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.59□□□□□ -1.19
RHBDL3P58872 SNORA51.9-201ENST00000384295 124 ntBASIC7.59□□□□□ -1.19
RHBDL3P58872 AL139415.1-201ENST00000424862 352 ntBASIC7.59□□□□□ -1.19
RHBDL3P58872 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.59□□□□□ -1.19
RHBDL3P58872 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.59□□□□□ -1.19
RHBDL3P58872 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC7.59□□□□□ -1.19
RHBDL3P58872 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RHBDL3P58872 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC7.59□□□□□ -1.19
RHBDL3P58872 COX6B1P4-201ENST00000519826 484 ntBASIC7.59□□□□□ -1.19
RHBDL3P58872 IGLV3-6-201ENST00000523937 250 ntBASIC7.59□□□□□ -1.19
RHBDL3P58872 TRIM51DP-201ENST00000529746 596 ntBASIC7.59□□□□□ -1.19
RHBDL3P58872 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms