Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CLRN1P58418 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.16□□□□□ -1.42
CLRN1P58418 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLRN1P58418 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.15□□□□□ -1.42
CLRN1P58418 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 TATDN2P3-201ENST00000452855 3665 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.15□□□□□ -1.42
CLRN1P58418 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CLRN1P58418 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 RNA5SP65-201ENST00000363166 119 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 RN7SKP271-201ENST00000410528 320 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC6.15□□□□□ -1.42
CLRN1P58418 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.15□□□□□ -1.42
CLRN1P58418 AL445183.3-201ENST00000414168 502 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 AL359633.1-201ENST00000421403 310 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.15□□□□□ -1.42
CLRN1P58418 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 SNRPEP5-201ENST00000425442 278 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 AC007365.2-201ENST00000428806 458 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.15□□□□□ -1.42
CLRN1P58418 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.15□□□□□ -1.42
CLRN1P58418 AC018804.1-201ENST00000430381 618 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.15□□□□□ -1.42
CLRN1P58418 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC6.15□□□□□ -1.42
CLRN1P58418 VN1R25P-201ENST00000443385 738 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 OR52I1-201ENST00000450052 1050 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 AC092155.2-201ENST00000454675 477 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.15□□□□□ -1.42
CLRN1P58418 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.15□□□□□ -1.42
CLRN1P58418 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 TPT1P3-201ENST00000492841 512 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 DCAF13P2-201ENST00000514188 555 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.15□□□□□ -1.42
CLRN1P58418 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.15□□□□□ -1.42
CLRN1P58418 AP001646.2-201ENST00000528645 1156 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 HNRNPCP8-201ENST00000528764 888 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.15□□□□□ -1.42
CLRN1P58418 OR4A40P-201ENST00000533878 948 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 PDCL3P1-201ENST00000534575 734 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 AC104229.1-201ENST00000561364 255 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC6.15□□□□□ -1.42
CLRN1P58418 AC027455.1-201ENST00000574104 594 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 AC008088.1-201ENST00000580993 280 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 PCNAP1-202ENST00000595299 752 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
CLRN1P58418 AC024085.1-201ENST00000604299 432 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 MIR6736-201ENST00000616799 59 ntBASIC6.15□□□□□ -1.42
CLRN1P58418 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.15□□□□□ -1.42
CLRN1P58418 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CLRN1P58418 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.15□□□□□ -1.42
CLRN1P58418 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLRN1P58418 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
CLRN1P58418 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.15□□□□□ -1.43
CLRN1P58418 AL355578.1-201ENST00000607405 1328 ntBASIC6.15□□□□□ -1.43
CLRN1P58418 AC008432.1-201ENST00000615912 1320 ntBASIC6.15□□□□□ -1.43
CLRN1P58418 AC119674.1-204ENST00000641348 1343 ntBASIC6.15□□□□□ -1.43
CLRN1P58418 AC126474.2-201ENST00000623268 1750 ntBASIC6.15□□□□□ -1.43
CLRN1P58418 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.15□□□□□ -1.43
CLRN1P58418 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.15□□□□□ -1.43
CLRN1P58418 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
CLRN1P58418 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.15□□□□□ -1.43
CLRN1P58418 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CLRN1P58418 AC005261.6-201ENST00000623072 1387 ntBASIC6.15□□□□□ -1.43
CLRN1P58418 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
CLRN1P58418 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms