Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AL591848.4-201ENST00000567832 3472 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMARCA4P51532 AL023806.3-201ENST00000638502 2704 ntBASIC10.75□□□□□ -0.69
SMARCA4P51532 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMARCA4P51532 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMARCA4P51532 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMARCA4P51532 GABARAPL3-201ENST00000412799 354 ntBASIC10.75□□□□□ -0.69
SMARCA4P51532 AC097721.1-201ENST00000427150 1253 ntBASIC10.75□□□□□ -0.69
SMARCA4P51532 HMGB3P24-201ENST00000433260 622 ntBASIC10.75□□□□□ -0.69
SMARCA4P51532 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMARCA4P51532 RPL23AP60-201ENST00000450011 454 ntBASIC10.75□□□□□ -0.69
SMARCA4P51532 AC073594.1-201ENST00000462065 364 ntBASIC10.75□□□□□ -0.69
SMARCA4P51532 AC024558.1-201ENST00000505008 528 ntBASIC10.75□□□□□ -0.69
SMARCA4P51532 APPL2-203ENST00000546731 684 ntTSL 2 BASIC10.75□□□□□ -0.69
SMARCA4P51532 IGBP1P1-201ENST00000554337 1009 ntBASIC10.75□□□□□ -0.69
SMARCA4P51532 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC10.75□□□□□ -0.69
SMARCA4P51532 TXNP4-201ENST00000575018 310 ntBASIC10.75□□□□□ -0.69
SMARCA4P51532 MIR8080-201ENST00000622224 89 ntBASIC10.75□□□□□ -0.69
SMARCA4P51532 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMARCA4P51532 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMARCA4P51532 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMARCA4P51532 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMARCA4P51532 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC10.75□□□□□ -0.69
SMARCA4P51532 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMARCA4P51532 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
SMARCA4P51532 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC10.74□□□□□ -0.69
SMARCA4P51532 RNA5SP211-201ENST00000365516 117 ntBASIC10.74□□□□□ -0.69
SMARCA4P51532 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC10.74□□□□□ -0.69
SMARCA4P51532 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC10.74□□□□□ -0.69
SMARCA4P51532 OR56A7P-201ENST00000524865 941 ntBASIC10.74□□□□□ -0.69
SMARCA4P51532 HAUS8P1-201ENST00000549005 542 ntBASIC10.74□□□□□ -0.69
SMARCA4P51532 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC10.74□□□□□ -0.69
SMARCA4P51532 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SMARCA4P51532 AC003992.1-201ENST00000635364 557 ntBASIC10.74□□□□□ -0.69
SMARCA4P51532 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SMARCA4P51532 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SMARCA4P51532 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SMARCA4P51532 YES1P1-201ENST00000418510 1628 ntBASIC10.74□□□□□ -0.69
SMARCA4P51532 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC10.74□□□□□ -0.69
SMARCA4P51532 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
SMARCA4P51532 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC10.74□□□□□ -0.69
SMARCA4P51532 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMARCA4P51532 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SMARCA4P51532 RNA5SP478-201ENST00000364657 115 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 SDC4P-201ENST00000453285 601 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 AC109481.1-201ENST00000509173 282 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 NRBF2P4-201ENST00000520874 850 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC10.73□□□□□ -0.69
SMARCA4P51532 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC10.73□□□□□ -0.69
SMARCA4P51532 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC10.73□□□□□ -0.69
SMARCA4P51532 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMARCA4P51532 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SMARCA4P51532 MIR6748-201ENST00000610433 71 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 uc_338.26-201ENST00000612659 160 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMARCA4P51532 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SMARCA4P51532 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMARCA4P51532 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
SMARCA4P51532 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC10.73□□□□□ -0.69
SMARCA4P51532 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SMARCA4P51532 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC10.73□□□□□ -0.69
SMARCA4P51532 AL161756.3-201ENST00000641216 2071 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 MFSD8-217ENST00000641178 4374 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
SMARCA4P51532 AL645927.1-201ENST00000396783 406 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 AP000534.2-201ENST00000412729 568 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 AL139148.1-201ENST00000427122 680 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 OR5M14P-201ENST00000506803 618 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC10.73□□□□□ -0.69
SMARCA4P51532 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
SMARCA4P51532 HMGB1P42-201ENST00000532126 553 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 AL445222.1-201ENST00000607259 628 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 AC007683.2-201ENST00000624681 714 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 AC022726.2-201ENST00000634673 547 ntBASIC10.73□□□□□ -0.69
SMARCA4P51532 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC10.73□□□□□ -0.69
SMARCA4P51532 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMARCA4P51532 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA4P51532 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC10.72□□□□□ -0.69
SMARCA4P51532 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA4P51532 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC10.72□□□□□ -0.69
SMARCA4P51532 AL359091.1-201ENST00000449048 1734 ntBASIC10.72□□□□□ -0.69
SMARCA4P51532 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
SMARCA4P51532 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SMARCA4P51532 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
SMARCA4P51532 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC10.72□□□□□ -0.69
SMARCA4P51532 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SMARCA4P51532 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA4P51532 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMARCA4P51532 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SMARCA4P51532 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SMARCA4P51532 MRM2-202ENST00000407040 582 ntTSL 3 BASIC10.72□□□□□ -0.69
SMARCA4P51532 H2AFZP6-201ENST00000444403 394 ntBASIC10.72□□□□□ -0.69
SMARCA4P51532 AC115223.1-201ENST00000466377 870 ntBASIC10.72□□□□□ -0.69
SMARCA4P51532 RN7SL583P-201ENST00000475692 287 ntBASIC10.72□□□□□ -0.69
SMARCA4P51532 HIGD1AP14-201ENST00000507617 282 ntBASIC10.72□□□□□ -0.69
SMARCA4P51532 OR8G3P-201ENST00000533406 921 ntBASIC10.72□□□□□ -0.69
SMARCA4P51532 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SMARCA4P51532 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
SMARCA4P51532 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC10.72□□□□□ -0.69
SMARCA4P51532 AC008115.4-201ENST00000619780 775 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms