Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MIR8075-201ENST00000614354 80 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 AC010205.1-201ENST00000616668 449 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 AC124944.3-204ENST00000641191 150 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 AC110998.1-201ENST00000519029 2053 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 AC016582.1-202ENST00000636341 2982 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
RNF144AP50876 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF144AP50876 AL645937.1-201ENST00000641739 1652 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 AL139811.2-201ENST00000373465 1630 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF144AP50876 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
RNF144AP50876 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RNF144AP50876 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF144AP50876 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF144AP50876 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF144AP50876 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF144AP50876 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.63□□□□□ -1.19
RNF144AP50876 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.63□□□□□ -1.19
RNF144AP50876 AC135352.1-201ENST00000506173 1418 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF144AP50876 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF144AP50876 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF144AP50876 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF144AP50876 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
RNF144AP50876 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.63□□□□□ -1.19
RNF144AP50876 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF144AP50876 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF144AP50876 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC7.63□□□□□ -1.19
RNF144AP50876 C12orf54-201ENST00000314014 887 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
RNF144AP50876 Y_RNA.89-201ENST00000363031 102 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 RNU6-501P-201ENST00000364072 100 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 RNU6-534P-201ENST00000364877 106 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC7.63□□□□□ -1.19
RNF144AP50876 MTCO3P40-201ENST00000392516 676 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 AC096664.1-201ENST00000393996 778 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 AC234778.1-201ENST00000399253 370 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 CYCSP45-201ENST00000402289 315 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF144AP50876 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.63□□□□□ -1.19
RNF144AP50876 FBP2P1-202ENST00000424473 530 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 AC073464.1-201ENST00000429823 534 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 AL008638.1-201ENST00000430468 473 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF144AP50876 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF144AP50876 AC234064.1-201ENST00000436312 247 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF144AP50876 FUNDC2P4-201ENST00000441207 421 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 AL080317.1-201ENST00000444259 557 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF144AP50876 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF144AP50876 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RNF144AP50876 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF144AP50876 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF144AP50876 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RNF144AP50876 OR13C1P-201ENST00000457612 963 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 RN7SL218P-201ENST00000464637 299 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 RPL30P9-201ENST00000465586 330 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 OR52A4P-201ENST00000472867 958 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.63□□□□□ -1.19
RNF144AP50876 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC7.63□□□□□ -1.19
RNF144AP50876 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF144AP50876 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF144AP50876 AC093281.1-201ENST00000514239 549 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF144AP50876 IGKV2D-14-201ENST00000522473 355 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 AC011379.2-201ENST00000523154 583 ntTSL 4 BASIC7.63□□□□□ -1.19
RNF144AP50876 AC022690.1-201ENST00000526681 550 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 AP005597.3-201ENST00000532369 799 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
RNF144AP50876 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF144AP50876 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF144AP50876 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF144AP50876 BCAP31P2-201ENST00000563143 399 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 BCAP31P1-201ENST00000565437 385 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 HLA-P-207ENST00000568192 747 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF144AP50876 AC010547.7-201ENST00000570323 333 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF144AP50876 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF144AP50876 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
RNF144AP50876 AL021878.2-201ENST00000602718 399 ntBASIC7.63□□□□□ -1.19
RNF144AP50876 AL021808.1-201ENST00000604325 1117 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms