Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 NEK2P2-201ENST00000438441 1338 ntBASIC6.55□□□□□ -1.36
HADHAP40939 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.55□□□□□ -1.36
HADHAP40939 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
HADHAP40939 SMG1P5-202ENST00000529428 4219 ntBASIC6.55□□□□□ -1.36
HADHAP40939 SMG1P2-201ENST00000566127 4221 ntBASIC6.55□□□□□ -1.36
HADHAP40939 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HADHAP40939 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HADHAP40939 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HADHAP40939 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.55□□□□□ -1.36
HADHAP40939 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HADHAP40939 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.55□□□□□ -1.36
HADHAP40939 SNORD94-201ENST00000386037 137 ntBASIC6.55□□□□□ -1.36
HADHAP40939 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HADHAP40939 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.55□□□□□ -1.36
HADHAP40939 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.55□□□□□ -1.36
HADHAP40939 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HADHAP40939 RPEP4-201ENST00000437636 602 ntBASIC6.55□□□□□ -1.36
HADHAP40939 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.55□□□□□ -1.36
HADHAP40939 CCNJP2-201ENST00000457810 1163 ntBASIC6.55□□□□□ -1.36
HADHAP40939 RN7SL393P-201ENST00000463588 296 ntBASIC6.55□□□□□ -1.36
HADHAP40939 AC005017.1-201ENST00000482002 490 ntBASIC6.55□□□□□ -1.36
HADHAP40939 RPL19P11-201ENST00000495944 589 ntBASIC6.55□□□□□ -1.36
HADHAP40939 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.55□□□□□ -1.36
HADHAP40939 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HADHAP40939 RNU6-551P-201ENST00000516661 103 ntBASIC6.55□□□□□ -1.36
HADHAP40939 AC084851.2-201ENST00000530377 364 ntBASIC6.55□□□□□ -1.36
HADHAP40939 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.55□□□□□ -1.36
HADHAP40939 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.55□□□□□ -1.36
HADHAP40939 HMGN2P47-201ENST00000559378 272 ntBASIC6.55□□□□□ -1.36
HADHAP40939 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.55□□□□□ -1.36
HADHAP40939 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.55□□□□□ -1.36
HADHAP40939 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.55□□□□□ -1.36
HADHAP40939 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.55□□□□□ -1.36
HADHAP40939 AC114477.1-201ENST00000605097 605 ntBASIC6.55□□□□□ -1.36
HADHAP40939 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.55□□□□□ -1.36
HADHAP40939 AL008582.1-201ENST00000609612 442 ntBASIC6.55□□□□□ -1.36
HADHAP40939 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.55□□□□□ -1.36
HADHAP40939 AC211486.4-201ENST00000621495 113 ntBASIC6.55□□□□□ -1.36
HADHAP40939 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HADHAP40939 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HADHAP40939 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
HADHAP40939 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HADHAP40939 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HADHAP40939 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HADHAP40939 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.54□□□□□ -1.36
HADHAP40939 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
HADHAP40939 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.54□□□□□ -1.36
HADHAP40939 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
HADHAP40939 AL929601.4-201ENST00000613011 1341 ntBASIC6.54□□□□□ -1.36
HADHAP40939 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HADHAP40939 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HADHAP40939 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.54□□□□□ -1.36
HADHAP40939 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.54□□□□□ -1.36
HADHAP40939 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
HADHAP40939 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HADHAP40939 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HADHAP40939 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HADHAP40939 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.54□□□□□ -1.36
HADHAP40939 AC245036.1-201ENST00000391727 309 ntBASIC6.54□□□□□ -1.36
HADHAP40939 AL033519.1-201ENST00000407266 307 ntBASIC6.54□□□□□ -1.36
HADHAP40939 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HADHAP40939 RNA5SP155-201ENST00000411154 129 ntBASIC6.54□□□□□ -1.36
HADHAP40939 YY1P1-201ENST00000427625 668 ntBASIC6.54□□□□□ -1.36
HADHAP40939 BMP6P1-201ENST00000431230 679 ntBASIC6.54□□□□□ -1.36
HADHAP40939 AC083855.1-201ENST00000440041 258 ntBASIC6.54□□□□□ -1.36
HADHAP40939 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.54□□□□□ -1.36
HADHAP40939 AL034369.1-201ENST00000453808 477 ntBASIC6.54□□□□□ -1.36
HADHAP40939 MTCYBP14-201ENST00000457471 715 ntBASIC6.54□□□□□ -1.36
HADHAP40939 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.54□□□□□ -1.36
HADHAP40939 SNX18P26-201ENST00000458433 740 ntBASIC6.54□□□□□ -1.36
HADHAP40939 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.54□□□□□ -1.36
HADHAP40939 AC005165.2-201ENST00000466070 380 ntBASIC6.54□□□□□ -1.36
HADHAP40939 RPL23AP64-201ENST00000469465 435 ntBASIC6.54□□□□□ -1.36
HADHAP40939 OR52A4P-203ENST00000498233 1014 ntBASIC6.54□□□□□ -1.36
HADHAP40939 RNU6-751P-201ENST00000516382 101 ntBASIC6.54□□□□□ -1.36
HADHAP40939 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HADHAP40939 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HADHAP40939 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.54□□□□□ -1.36
HADHAP40939 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HADHAP40939 AC073916.1-201ENST00000545095 130 ntBASIC6.54□□□□□ -1.36
HADHAP40939 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.54□□□□□ -1.36
HADHAP40939 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.54□□□□□ -1.36
HADHAP40939 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HADHAP40939 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HADHAP40939 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.54□□□□□ -1.36
HADHAP40939 AC010547.7-201ENST00000570323 333 ntBASIC6.54□□□□□ -1.36
HADHAP40939 AP000919.1-201ENST00000582850 985 ntBASIC6.54□□□□□ -1.36
HADHAP40939 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.54□□□□□ -1.36
HADHAP40939 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.54□□□□□ -1.36
HADHAP40939 SNORD96A-201ENST00000606577 79 ntBASIC6.54□□□□□ -1.36
HADHAP40939 AL137246.2-201ENST00000613439 662 ntBASIC6.54□□□□□ -1.36
HADHAP40939 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.54□□□□□ -1.36
HADHAP40939 CLUHP10-201ENST00000631979 980 ntBASIC6.54□□□□□ -1.36
HADHAP40939 AL355377.1-201ENST00000621125 1653 ntBASIC6.54□□□□□ -1.36
HADHAP40939 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.54□□□□□ -1.36
HADHAP40939 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.54□□□□□ -1.36
HADHAP40939 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HADHAP40939 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.54□□□□□ -1.36
HADHAP40939 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HADHAP40939 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms