Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RPL9P15-201ENST00000491096 532 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.69□□□□□ -1.34
HOXC12P31275 AC093325.1-201ENST00000508378 326 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.69□□□□□ -1.34
HOXC12P31275 RN7SKP2-201ENST00000517003 319 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC6.69□□□□□ -1.34
HOXC12P31275 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC12P31275 AP001804.2-201ENST00000533932 910 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.69□□□□□ -1.34
HOXC12P31275 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.69□□□□□ -1.34
HOXC12P31275 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC6.69□□□□□ -1.34
HOXC12P31275 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.69□□□□□ -1.34
HOXC12P31275 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.69□□□□□ -1.34
HOXC12P31275 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.69□□□□□ -1.34
HOXC12P31275 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
HOXC12P31275 ARGFXP2-201ENST00000579304 949 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC6.69□□□□□ -1.34
HOXC12P31275 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC12P31275 AC018618.2-201ENST00000604770 446 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 AL021707.7-201ENST00000607991 416 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 5S_rRNA.20-201ENST00000612104 118 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 FRG2MP-201ENST00000613317 856 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC12P31275 AL121985.3-201ENST00000620690 523 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 OR1S1-201ENST00000624470 978 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HOXC12P31275 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC12P31275 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC12P31275 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC12P31275 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.69□□□□□ -1.34
HOXC12P31275 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC6.69□□□□□ -1.34
HOXC12P31275 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
HOXC12P31275 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC6.69□□□□□ -1.34
HOXC12P31275 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC12P31275 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.69□□□□□ -1.34
HOXC12P31275 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.69□□□□□ -1.34
HOXC12P31275 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 NCOA4P2-201ENST00000340589 1813 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 AC017007.4-201ENST00000503353 1352 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
HOXC12P31275 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC12P31275 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.68□□□□□ -1.34
HOXC12P31275 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC12P31275 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC12P31275 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC6.68□□□□□ -1.34
HOXC12P31275 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.68□□□□□ -1.34
HOXC12P31275 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC12P31275 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC12P31275 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC12P31275 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.68□□□□□ -1.34
HOXC12P31275 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC12P31275 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC12P31275 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC12P31275 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC12P31275 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
HOXC12P31275 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HOXC12P31275 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HOXC12P31275 RNA5SP35-201ENST00000391257 129 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 YWHAZP4-201ENST00000392459 708 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 SRI-202ENST00000394641 653 ntTSL 2 BASIC6.68□□□□□ -1.34
HOXC12P31275 RN7SKP207-201ENST00000411204 303 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.68□□□□□ -1.34
HOXC12P31275 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.68□□□□□ -1.34
HOXC12P31275 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC6.68□□□□□ -1.34
HOXC12P31275 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.68□□□□□ -1.34
HOXC12P31275 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 SETP9-201ENST00000423837 832 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 RPF2P1-201ENST00000424137 906 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 RNF11P2-201ENST00000427702 440 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 AL035407.1-201ENST00000429211 571 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 EMC3-AS1-205ENST00000438698 534 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 AL445567.1-201ENST00000439121 144 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 AC123904.1-201ENST00000441072 368 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 RPS7P4-201ENST00000444127 582 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.68□□□□□ -1.34
HOXC12P31275 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.68□□□□□ -1.34
HOXC12P31275 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.68□□□□□ -1.34
HOXC12P31275 RPL31P3-201ENST00000458430 332 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC12P31275 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.68□□□□□ -1.34
HOXC12P31275 RN7SL335P-201ENST00000482790 304 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.68□□□□□ -1.34
HOXC12P31275 AC122714.1-201ENST00000502510 459 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 AC105391.1-201ENST00000503155 1045 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 PSMA2P2-201ENST00000504319 686 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
HOXC12P31275 AC100823.2-201ENST00000518337 699 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.68□□□□□ -1.34
HOXC12P31275 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HOXC12P31275 NF1P12-201ENST00000549593 583 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 COX4I1P1-201ENST00000554239 509 ntBASIC6.68□□□□□ -1.34
HOXC12P31275 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.68□□□□□ -1.34
HOXC12P31275 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.68□□□□□ -1.34
HOXC12P31275 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC6.68□□□□□ -1.34
HOXC12P31275 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.68□□□□□ -1.34
HOXC12P31275 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.68□□□□□ -1.34
HOXC12P31275 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.68□□□□□ -1.34
HOXC12P31275 MIR1273F-201ENST00000580581 99 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms