Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXC8P31273 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXC8P31273 TRIM60P16-201ENST00000444048 694 ntBASIC6.86□□□□□ -1.31
HOXC8P31273 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXC8P31273 AC005077.1-201ENST00000449226 375 ntBASIC6.86□□□□□ -1.31
HOXC8P31273 BZW1P1-201ENST00000454901 1240 ntBASIC6.86□□□□□ -1.31
HOXC8P31273 NXT1P1-201ENST00000458481 316 ntBASIC6.86□□□□□ -1.31
HOXC8P31273 AC104109.1-201ENST00000498563 436 ntBASIC6.86□□□□□ -1.31
HOXC8P31273 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HOXC8P31273 Y_RNA.710-201ENST00000516975 110 ntBASIC6.86□□□□□ -1.31
HOXC8P31273 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HOXC8P31273 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXC8P31273 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HOXC8P31273 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXC8P31273 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXC8P31273 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.86□□□□□ -1.31
HOXC8P31273 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.86□□□□□ -1.31
HOXC8P31273 AC097467.4-201ENST00000605504 141 ntBASIC6.86□□□□□ -1.31
HOXC8P31273 MIR6886-201ENST00000619864 61 ntBASIC6.86□□□□□ -1.31
HOXC8P31273 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.86□□□□□ -1.31
HOXC8P31273 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.86□□□□□ -1.31
HOXC8P31273 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXC8P31273 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXC8P31273 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXC8P31273 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXC8P31273 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXC8P31273 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
HOXC8P31273 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
HOXC8P31273 GUCY1B2-204ENST00000531898 1979 ntBASIC6.86□□□□□ -1.31
HOXC8P31273 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HOXC8P31273 PSG10P-201ENST00000501199 1500 ntBASIC6.86□□□□□ -1.31
HOXC8P31273 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXC8P31273 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXC8P31273 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.85□□□□□ -1.31
HOXC8P31273 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 AC027279.1-201ENST00000568885 4284 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 AC068733.2-201ENST00000605434 1418 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.85□□□□□ -1.31
HOXC8P31273 AC105235.1-201ENST00000623208 1816 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 AL359922.2-201ENST00000581788 3017 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.85□□□□□ -1.31
HOXC8P31273 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.85□□□□□ -1.31
HOXC8P31273 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 RNA5SP350-201ENST00000363298 111 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.85□□□□□ -1.31
HOXC8P31273 AC005522.1-201ENST00000395416 346 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.85□□□□□ -1.31
HOXC8P31273 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 GAPDHP75-201ENST00000433910 943 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 FTLP8-201ENST00000446770 267 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 MGAT2P1-201ENST00000449718 797 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 RANP2-201ENST00000456833 229 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 SNX18P26-201ENST00000458433 740 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 AC018638.3-201ENST00000461273 132 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.85□□□□□ -1.31
HOXC8P31273 AC011476.1-201ENST00000466725 307 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 NPM1P27-201ENST00000502784 830 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 SNORA81.2-201ENST00000516868 170 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.85□□□□□ -1.31
HOXC8P31273 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.85□□□□□ -1.31
HOXC8P31273 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.85□□□□□ -1.31
HOXC8P31273 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.85□□□□□ -1.31
HOXC8P31273 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.85□□□□□ -1.31
HOXC8P31273 AC011445.2-201ENST00000599274 173 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 MIR6793-201ENST00000612376 63 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.85□□□□□ -1.31
HOXC8P31273 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.85□□□□□ -1.31
HOXC8P31273 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.85□□□□□ -1.31
HOXC8P31273 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HOXC8P31273 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
HOXC8P31273 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HOXC8P31273 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
HOXC8P31273 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC8P31273 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.85□□□□□ -1.31
HOXC8P31273 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.85□□□□□ -1.31
HOXC8P31273 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.84□□□□□ -1.31
HOXC8P31273 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC8P31273 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC8P31273 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC8P31273 FO082842.1-201ENST00000423552 1370 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.84□□□□□ -1.31
HOXC8P31273 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC8P31273 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
HOXC8P31273 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
HOXC8P31273 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC8P31273 OR11H13P-201ENST00000359695 979 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 RN7SKP81-201ENST00000365603 331 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms