Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC006924.1-201ENST00000610750 559 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC7.26□□□□□ -1.25
POLR2AP24928 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
POLR2AP24928 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.26□□□□□ -1.25
POLR2AP24928 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.26□□□□□ -1.25
POLR2AP24928 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
POLR2AP24928 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.25□□□□□ -1.25
POLR2AP24928 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
POLR2AP24928 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.25□□□□□ -1.25
POLR2AP24928 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
POLR2AP24928 AC027088.4-201ENST00000611559 1947 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
POLR2AP24928 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
POLR2AP24928 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
POLR2AP24928 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
POLR2AP24928 NMD3P2-201ENST00000421815 761 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC7.25□□□□□ -1.25
POLR2AP24928 HSFY7P-201ENST00000432672 318 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.25□□□□□ -1.25
POLR2AP24928 FMO7P-201ENST00000436045 768 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 HSFY8P-201ENST00000437934 318 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.25□□□□□ -1.25
POLR2AP24928 MYO5BP2-201ENST00000449815 1277 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.25□□□□□ -1.25
POLR2AP24928 HSFY5P-201ENST00000453726 309 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 SNORA58-201ENST00000505219 137 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 RNU6-551P-201ENST00000516661 103 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC7.25□□□□□ -1.25
POLR2AP24928 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
POLR2AP24928 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.25□□□□□ -1.25
POLR2AP24928 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.25□□□□□ -1.25
POLR2AP24928 OR7A1P-201ENST00000601206 970 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 AC100814.1-201ENST00000606963 623 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
POLR2AP24928 CCNT2P1-201ENST00000423082 1315 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
POLR2AP24928 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC7.25□□□□□ -1.25
POLR2AP24928 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
POLR2AP24928 PABPC1P6-201ENST00000445594 1829 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.25□□□□□ -1.25
POLR2AP24928 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC7.25□□□□□ -1.25
POLR2AP24928 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
POLR2AP24928 OR7E25P-202ENST00000641088 5937 ntBASIC7.25□□□□□ -1.25
POLR2AP24928 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
POLR2AP24928 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
POLR2AP24928 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.24□□□□□ -1.25
POLR2AP24928 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
POLR2AP24928 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
POLR2AP24928 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
POLR2AP24928 RNU1-19P-201ENST00000363306 165 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.24□□□□□ -1.25
POLR2AP24928 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.24□□□□□ -1.25
POLR2AP24928 AL713922.1-201ENST00000416477 747 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.24□□□□□ -1.25
POLR2AP24928 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.24□□□□□ -1.25
POLR2AP24928 NPM1P22-201ENST00000427761 952 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.24□□□□□ -1.25
POLR2AP24928 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC7.24□□□□□ -1.25
POLR2AP24928 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.24□□□□□ -1.25
POLR2AP24928 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC7.24□□□□□ -1.25
POLR2AP24928 RN7SL466P-201ENST00000497546 295 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.24□□□□□ -1.25
POLR2AP24928 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
POLR2AP24928 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.24□□□□□ -1.25
POLR2AP24928 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.24□□□□□ -1.25
POLR2AP24928 PCNAP4-201ENST00000532690 730 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 AC092865.1-201ENST00000544395 1023 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 AC079600.1-201ENST00000550326 297 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
POLR2AP24928 AL359704.2-201ENST00000604335 521 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 AC136428.4-201ENST00000634254 1155 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
POLR2AP24928 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
POLR2AP24928 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
POLR2AP24928 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.24□□□□□ -1.25
POLR2AP24928 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.24□□□□□ -1.25
POLR2AP24928 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
POLR2AP24928 LINC02019-201ENST00000608605 2060 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 AC138915.4-201ENST00000565549 4147 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
POLR2AP24928 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
POLR2AP24928 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
POLR2AP24928 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
POLR2AP24928 RN7SKP160-201ENST00000363804 340 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.24□□□□□ -1.25
POLR2AP24928 RN7SKP216-201ENST00000411050 312 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.24□□□□□ -1.25
POLR2AP24928 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.24□□□□□ -1.25
POLR2AP24928 RN7SL860P-201ENST00000473738 223 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 OR5M14P-201ENST00000506803 618 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.24□□□□□ -1.25
POLR2AP24928 AC110056.1-201ENST00000525759 911 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 OR10G5P-201ENST00000532733 358 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 RPA2P3-201ENST00000533268 770 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC7.24□□□□□ -1.25
POLR2AP24928 AL023583.1-201ENST00000607518 1143 ntBASIC7.24□□□□□ -1.25
POLR2AP24928 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
POLR2AP24928 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
POLR2AP24928 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.24□□□□□ -1.25
POLR2AP24928 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms