Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC4P09017 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXC4P09017 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC4P09017 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC4P09017 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC4P09017 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC4P09017 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HOXC4P09017 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HOXC4P09017 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC4P09017 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC4P09017 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC4P09017 SNORA21-201ENST00000362423 132 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC4P09017 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.16□□□□□ -1.42
HOXC4P09017 UBE2V1P14-201ENST00000415815 558 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC4P09017 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC4P09017 LDHAP2-201ENST00000437325 985 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 AMYP1-201ENST00000440059 1023 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 RPS10P18-201ENST00000442662 495 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC4P09017 RANP2-201ENST00000456833 229 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 AC068228.1-201ENST00000461723 211 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXC4P09017 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC4P09017 IGKV3D-25-201ENST00000519599 235 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.16□□□□□ -1.42
HOXC4P09017 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.16□□□□□ -1.42
HOXC4P09017 NDUFA5P11-201ENST00000567995 343 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXC4P09017 MIR4310-201ENST00000582950 57 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 AC008507.3-201ENST00000585753 472 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXC4P09017 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.16□□□□□ -1.42
HOXC4P09017 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXC4P09017 AC091167.5-201ENST00000605689 894 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 PCA3_2.1-201ENST00000612507 409 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXC4P09017 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXC4P09017 AL133243.2-201ENST00000610331 1621 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC4P09017 GUCY1B2-204ENST00000531898 1979 ntBASIC6.16□□□□□ -1.42
HOXC4P09017 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC4P09017 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXC4P09017 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
HOXC4P09017 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC4P09017 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
HOXC4P09017 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HOXC4P09017 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
HOXC4P09017 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC4P09017 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXC4P09017 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
HOXC4P09017 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HOXC4P09017 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC4P09017 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXC4P09017 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC4P09017 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC4P09017 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC4P09017 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HOXC4P09017 OR7E156P-201ENST00000400303 464 ntBASIC6.15□□□□□ -1.42
HOXC4P09017 MIR1282-201ENST00000408865 101 ntBASIC6.15□□□□□ -1.42
HOXC4P09017 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC4P09017 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC4P09017 AC110602.1-201ENST00000437414 318 ntBASIC6.15□□□□□ -1.42
HOXC4P09017 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC4P09017 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC4P09017 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC4P09017 AC002553.3-201ENST00000453002 341 ntBASIC6.15□□□□□ -1.42
HOXC4P09017 PPIAP27-201ENST00000453800 265 ntBASIC6.15□□□□□ -1.42
HOXC4P09017 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC4P09017 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC4P09017 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXC4P09017 RN7SKP35-201ENST00000517210 151 ntBASIC6.15□□□□□ -1.42
HOXC4P09017 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXC4P09017 KCTD9P4-201ENST00000526766 1166 ntBASIC6.15□□□□□ -1.42
HOXC4P09017 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXC4P09017 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXC4P09017 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC4P09017 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXC4P09017 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC4P09017 AC092681.3-201ENST00000609463 678 ntBASIC6.15□□□□□ -1.42
HOXC4P09017 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC4P09017 AC024255.1-201ENST00000614376 102 ntBASIC6.15□□□□□ -1.42
HOXC4P09017 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.15□□□□□ -1.42
HOXC4P09017 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HOXC4P09017 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXC4P09017 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC4P09017 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
HOXC4P09017 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.15□□□□□ -1.43
HOXC4P09017 AC127070.3-201ENST00000503695 3263 ntBASIC6.15□□□□□ -1.43
HOXC4P09017 AC093225.1-201ENST00000506867 1408 ntBASIC6.15□□□□□ -1.43
HOXC4P09017 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC4P09017 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.15□□□□□ -1.43
HOXC4P09017 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC4P09017 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.15□□□□□ -1.43
HOXC4P09017 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC4P09017 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.15□□□□□ -1.43
HOXC4P09017 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC4P09017 CDY10P-201ENST00000452415 1567 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms