Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 ZNF806-201ENST00000438300 1774 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 UBBP1-201ENST00000392399 473 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AC138761.5-201ENST00000433967 325 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 ANXA2P2-201ENST00000435128 1020 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 OSTCP2-201ENST00000437956 444 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 DBIL5P2-201ENST00000443827 253 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AC073072.2-201ENST00000447425 348 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 RPL23AP28-201ENST00000448062 470 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 RPSAP48-201ENST00000466509 889 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 RN7SL456P-201ENST00000469290 295 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AC022206.1-201ENST00000495947 347 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 GLUD1P3-202ENST00000508551 200 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 IGKV1D-32-201ENST00000517449 318 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AP001994.1-201ENST00000527539 826 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 NF1P12-201ENST00000549593 583 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 DPPA3P2-202ENST00000557188 1219 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 NIFKP4-201ENST00000567275 1192 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 ZNF322P1-201ENST00000568013 1209 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AC011447.2-201ENST00000592921 283 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AL583832.1-201ENST00000603227 784 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AC113361.1-201ENST00000606683 543 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AL121985.3-201ENST00000620690 523 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 DLST-216ENST00000626051 252 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AP001157.1-201ENST00000550837 2339 ntBASIC4.68□□□□□ -1.66
HLA-DQA1P01909 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HLA-DQA1P01909 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 TCP11X1-202ENST00000622971 1372 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 OR10D1P-201ENST00000355343 936 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 VIM2P-201ENST00000402383 1294 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 RNU6-233P-201ENST00000410845 141 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 METTL15P3-201ENST00000415522 1221 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AL359092.1-201ENST00000417156 265 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AL359633.1-201ENST00000421403 310 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 ELOBP4-201ENST00000423418 296 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 ZBTB8OSP2-201ENST00000423890 504 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 CENPN-204ENST00000428963 971 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 FTLP17-201ENST00000432567 525 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 RN7SL776P-201ENST00000493390 268 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 AC010409.2-201ENST00000505780 478 ntBASIC4.67□□□□□ -1.66
HLA-DQA1P01909 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQA1P01909 IGLC4-201ENST00000517690 248 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms