Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
SNX3O60493 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX3O60493 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SNX3O60493 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SNX3O60493 AC009962.1-201ENST00000567327 3813 ntBASIC6.05□□□□□ -1.44
SNX3O60493 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX3O60493 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX3O60493 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX3O60493 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX3O60493 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX3O60493 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX3O60493 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX3O60493 AC023886.2-201ENST00000321285 411 ntBASIC6.05□□□□□ -1.44
SNX3O60493 RNA5SP382-201ENST00000363355 112 ntBASIC6.05□□□□□ -1.44
SNX3O60493 SNORD35A-201ENST00000363389 86 ntBASIC6.05□□□□□ -1.44
SNX3O60493 MRPS6P2-201ENST00000381143 370 ntBASIC6.05□□□□□ -1.44
SNX3O60493 MIR99A-201ENST00000384906 81 ntBASIC6.05□□□□□ -1.44
SNX3O60493 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX3O60493 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX3O60493 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX3O60493 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX3O60493 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX3O60493 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX3O60493 NPM1P25-201ENST00000429734 854 ntBASIC6.05□□□□□ -1.44
SNX3O60493 AL354893.1-201ENST00000433735 348 ntBASIC6.05□□□□□ -1.44
SNX3O60493 AC138761.5-201ENST00000433967 325 ntBASIC6.05□□□□□ -1.44
SNX3O60493 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX3O60493 MORF4-201ENST00000447135 971 ntBASIC6.05□□□□□ -1.44
SNX3O60493 AC073072.2-201ENST00000447425 348 ntBASIC6.05□□□□□ -1.44
SNX3O60493 CCNJP1-201ENST00000450600 1149 ntBASIC6.05□□□□□ -1.44
SNX3O60493 RN7SL352P-201ENST00000466002 277 ntBASIC6.05□□□□□ -1.44
SNX3O60493 PDCL3P4-201ENST00000489621 720 ntBASIC6.05□□□□□ -1.44
SNX3O60493 MTCO1P55-201ENST00000489829 745 ntBASIC6.05□□□□□ -1.44
SNX3O60493 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.05□□□□□ -1.44
SNX3O60493 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX3O60493 IGKV2D-38-201ENST00000518423 240 ntBASIC6.05□□□□□ -1.44
SNX3O60493 AC084033.1-201ENST00000550830 633 ntBASIC6.05□□□□□ -1.44
SNX3O60493 AC126615.2-201ENST00000553003 515 ntBASIC6.05□□□□□ -1.44
SNX3O60493 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX3O60493 TPRX1P1-201ENST00000557620 319 ntBASIC6.05□□□□□ -1.44
SNX3O60493 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX3O60493 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.05□□□□□ -1.44
SNX3O60493 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX3O60493 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX3O60493 AC006115.2-201ENST00000596823 202 ntBASIC6.05□□□□□ -1.44
SNX3O60493 AC005899.7-201ENST00000618199 588 ntBASIC6.05□□□□□ -1.44
SNX3O60493 AL137067.2-201ENST00000621202 131 ntBASIC6.05□□□□□ -1.44
SNX3O60493 MIR665-201ENST00000635949 72 ntBASIC6.05□□□□□ -1.44
SNX3O60493 AC099654.15-201ENST00000639802 509 ntBASIC6.05□□□□□ -1.44
SNX3O60493 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX3O60493 AC024587.1-201ENST00000505925 2157 ntBASIC6.05□□□□□ -1.44
SNX3O60493 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX3O60493 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX3O60493 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SNX3O60493 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX3O60493 AL161912.4-201ENST00000623889 2468 ntBASIC6.05□□□□□ -1.44
SNX3O60493 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX3O60493 RPL31P11-201ENST00000426558 1558 ntBASIC6.05□□□□□ -1.44
SNX3O60493 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX3O60493 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX3O60493 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX3O60493 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX3O60493 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SNX3O60493 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX3O60493 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SNX3O60493 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNX3O60493 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX3O60493 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX3O60493 AC016583.1-201ENST00000624221 2431 ntBASIC6.04□□□□□ -1.44
SNX3O60493 OR2A3P-202ENST00000641249 1776 ntBASIC6.04□□□□□ -1.44
SNX3O60493 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX3O60493 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX3O60493 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX3O60493 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SNX3O60493 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX3O60493 SNORA43.1-201ENST00000364863 140 ntBASIC6.04□□□□□ -1.44
SNX3O60493 RN7SKP130-201ENST00000364924 301 ntBASIC6.04□□□□□ -1.44
SNX3O60493 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX3O60493 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNX3O60493 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX3O60493 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX3O60493 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX3O60493 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX3O60493 AC027124.1-201ENST00000440852 466 ntBASIC6.04□□□□□ -1.44
SNX3O60493 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.04□□□□□ -1.44
SNX3O60493 MED28P3-201ENST00000444288 531 ntBASIC6.04□□□□□ -1.44
SNX3O60493 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.04□□□□□ -1.44
SNX3O60493 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX3O60493 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX3O60493 AC124945.1-201ENST00000485133 188 ntBASIC6.04□□□□□ -1.44
SNX3O60493 AC111000.6-201ENST00000514471 709 ntBASIC6.04□□□□□ -1.44
SNX3O60493 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX3O60493 AC107952.1-201ENST00000524200 376 ntBASIC6.04□□□□□ -1.44
SNX3O60493 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX3O60493 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX3O60493 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.04□□□□□ -1.44
SNX3O60493 AC019322.1-201ENST00000571869 389 ntBASIC6.04□□□□□ -1.44
SNX3O60493 MIR378C-201ENST00000578683 81 ntBASIC6.04□□□□□ -1.44
SNX3O60493 MIR1273F-201ENST00000580581 99 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms