Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC188H7C350 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC188H7C350 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC188H7C350 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC188H7C350 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
CCDC188H7C350 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
CCDC188H7C350 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC188H7C350 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC188H7C350 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC188H7C350 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC188H7C350 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCDC188H7C350 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC188H7C350 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.46□□□□□ -1.38
CCDC188H7C350 RPS3AP38-201ENST00000435889 763 ntBASIC6.46□□□□□ -1.38
CCDC188H7C350 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCDC188H7C350 AC022080.2-201ENST00000452932 533 ntBASIC6.46□□□□□ -1.38
CCDC188H7C350 OSTCP1-201ENST00000455507 450 ntBASIC6.46□□□□□ -1.38
CCDC188H7C350 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC188H7C350 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC188H7C350 AC090589.1-201ENST00000473109 362 ntBASIC6.46□□□□□ -1.38
CCDC188H7C350 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC188H7C350 AC112184.1-201ENST00000505179 312 ntBASIC6.46□□□□□ -1.38
CCDC188H7C350 AC093870.1-201ENST00000506837 213 ntBASIC6.46□□□□□ -1.38
CCDC188H7C350 MTCO3P42-201ENST00000509488 518 ntBASIC6.46□□□□□ -1.38
CCDC188H7C350 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC188H7C350 MTCO3P39-201ENST00000514812 518 ntBASIC6.46□□□□□ -1.38
CCDC188H7C350 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC188H7C350 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC188H7C350 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC188H7C350 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC188H7C350 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC188H7C350 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC188H7C350 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC188H7C350 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.46□□□□□ -1.38
CCDC188H7C350 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC188H7C350 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
CCDC188H7C350 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
CCDC188H7C350 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
CCDC188H7C350 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCDC188H7C350 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 TET1P1-201ENST00000426627 2301 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 AL355834.1-201ENST00000556602 3965 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC188H7C350 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CCDC188H7C350 HSPD1P1-201ENST00000503199 1726 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC188H7C350 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC188H7C350 SYT14P1-202ENST00000600441 1448 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC188H7C350 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CCDC188H7C350 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CCDC188H7C350 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 SNORA43.1-201ENST00000364863 140 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 MIR301B-201ENST00000390813 78 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 RPL12P23-201ENST00000405880 490 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC188H7C350 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC188H7C350 AL589794.1-201ENST00000424971 390 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC188H7C350 RPL5P10-201ENST00000445207 894 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 AL162739.1-201ENST00000450606 307 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC188H7C350 AKR1D1P1-201ENST00000457236 936 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 AP002371.1-201ENST00000463604 433 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 RN7SL643P-201ENST00000471845 291 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
CCDC188H7C350 MTCO1P55-201ENST00000489829 745 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC188H7C350 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC188H7C350 SCARNA11.1-201ENST00000516918 132 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC188H7C350 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC188H7C350 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC188H7C350 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC188H7C350 MIR5010-201ENST00000582846 120 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 SYPL1P2-201ENST00000582878 727 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC188H7C350 AP001357.1-201ENST00000586304 1053 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC188H7C350 AC012175.1-201ENST00000603755 531 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 AC018690.1-201ENST00000608144 626 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 AC009283.1-201ENST00000615852 645 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 AC018558.4-201ENST00000622153 281 ntBASIC6.45□□□□□ -1.38
CCDC188H7C350 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC188H7C350 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC188H7C350 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC188H7C350 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC188H7C350 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC188H7C350 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms