Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AP002004.1-206ENST00000532441 876 ntBASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 AL591222.2-201ENST00000604443 754 ntBASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 AC007671.1-201ENST00000616957 830 ntBASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 MIR7854-201ENST00000620068 65 ntBASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 AC000095.2-202ENST00000637415 154 ntBASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 AC027575.3-201ENST00000583058 2747 ntBASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 AC004023.1-201ENST00000561473 1744 ntBASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNB1IP1Q9NPC3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 CCNT2P1-201ENST00000423082 1315 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 KYNUP3-201ENST00000574386 1341 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 RNA5SP321-201ENST00000362722 111 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 ZNF37CP-201ENST00000406795 241 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 RN7SKP205-201ENST00000410999 307 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AL365220.1-201ENST00000432923 399 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC083855.1-201ENST00000440041 258 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 RPL5P10-201ENST00000445207 894 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC022080.2-201ENST00000452932 533 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 RPL26P30-201ENST00000453533 435 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 RNU6-964P-201ENST00000516524 69 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 HMGN2P47-201ENST00000559378 272 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC068408.1-201ENST00000577406 1144 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC100832.2-201ENST00000582080 776 ntBASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNB1IP1Q9NPC3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCNB1IP1Q9NPC3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCNB1IP1Q9NPC3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCNB1IP1Q9NPC3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CCNB1IP1Q9NPC3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
CCNB1IP1Q9NPC3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 NLRP3P1-201ENST00000622303 1785 ntBASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 RN7SKP191-201ENST00000364713 306 ntBASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 RNU11-6P-201ENST00000391127 133 ntBASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 AL354868.1-201ENST00000417077 482 ntBASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.83□□□□□ -1.48
CCNB1IP1Q9NPC3 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms