Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AP001541.1-201ENST00000623322 1904 ntBASIC6.05□□□□□ -1.44
LRTM1Q9HBL6 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.05□□□□□ -1.44
LRTM1Q9HBL6 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 CCNT2P1-201ENST00000423082 1315 ntBASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 SNORA70.9-201ENST00000384370 135 ntBASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AL445238.1-204ENST00000400311 463 ntBASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 MIR1266-201ENST00000408125 84 ntBASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 RN7SKP129-201ENST00000410288 299 ntBASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AC006509.1-201ENST00000420788 634 ntBASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 RN7SL393P-201ENST00000463588 296 ntBASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 SLC25A51P1-201ENST00000468432 871 ntBASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AC114728.1-201ENST00000488289 483 ntBASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 RN7SL475P-201ENST00000583379 298 ntBASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AC027229.1-201ENST00000583887 253 ntBASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 AC003992.1-201ENST00000635364 557 ntBASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LRTM1Q9HBL6 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AP000641.1-201ENST00000531988 1639 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AL136984.1-201ENST00000607611 1893 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 RN7SKP146-201ENST00000410242 334 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 RPL23AP18-201ENST00000416139 468 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 H3F3BP1-201ENST00000440551 403 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 HMGN1P32-201ENST00000441744 256 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AL355032.1-201ENST00000472981 438 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 RN7SL413P-201ENST00000482700 297 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AC093664.1-201ENST00000511779 289 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AC139713.1-202ENST00000512366 460 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 RN7SKP183-201ENST00000517169 324 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 RPA2P3-201ENST00000533268 770 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 OR9G2P-201ENST00000533326 880 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 OR4A6P-201ENST00000534364 970 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 NPIPB1P-202ENST00000588786 828 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AC005332.4-201ENST00000592752 579 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AC036176.3-201ENST00000602456 418 ntBASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.03□□□□□ -1.44
LRTM1Q9HBL6 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms