Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RN7SKP128-201ENST00000364270 303 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 Z68868.1-201ENST00000429048 544 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AL663074.2-201ENST00000440621 479 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AL133406.3-201ENST00000606817 541 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC010998.3-201ENST00000613871 631 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC087565.3-203ENST00000641018 837 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC005618.1-201ENST00000606901 3148 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC007614.5-201ENST00000623424 8892 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 RN7SKP166-201ENST00000410812 305 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 RPS27AP6-201ENST00000427962 448 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AL122020.1-201ENST00000472287 459 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 RPL5P22-201ENST00000480199 884 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 RN7SL30P-201ENST00000488416 306 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 MIR4646-201ENST00000580775 63 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 OR7A1P-202ENST00000641542 1158 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 NUP210L-203ENST00000368559 5889 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 NIPAL3-201ENST00000003912 5481 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 RNA5SP65-201ENST00000363166 119 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 HMGA1P8-201ENST00000414130 321 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 COX6CP17-201ENST00000421389 185 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AL157777.1-201ENST00000468100 304 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC115837.1-201ENST00000517662 1001 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 MIR3934-201ENST00000579806 107 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC010245.2-201ENST00000606908 1167 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 MIR7641-1-201ENST00000627518 61 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AC073869.10-201ENST00000642016 354 ntBASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 LAMA3-201ENST00000269217 5671 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AC010132.2-201ENST00000295493 1043 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 MRPL53P1-201ENST00000414323 319 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 OR6E1P-201ENST00000414424 923 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 PPIAP10-201ENST00000438675 458 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 RPS23P9-201ENST00000448848 438 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AL450023.1-201ENST00000450868 751 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 RPL7AP28-201ENST00000464513 571 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 IGKV1D-22-201ENST00000518953 324 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 TAS2R6P-201ENST00000605022 826 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 AL109618.2-201ENST00000605527 211 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 MIR6085-201ENST00000618314 110 ntBASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
CSMD1Q96PZ7 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms