Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 GAPDHP57-201ENST00000424400 585 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.45□□□□□ -1.22
ERCC4Q92889 AC073508.1-201ENST00000428866 656 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 NPM1P48-201ENST00000436002 853 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC4Q92889 AL158214.1-201ENST00000444423 404 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.45□□□□□ -1.22
ERCC4Q92889 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.45□□□□□ -1.22
ERCC4Q92889 RAB28P2-201ENST00000454299 641 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 RPS4XP19-201ENST00000460237 736 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC4Q92889 RN7SL390P-201ENST00000470634 284 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.45□□□□□ -1.22
ERCC4Q92889 RN7SL654P-201ENST00000479178 292 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.45□□□□□ -1.22
ERCC4Q92889 AC021146.11-201ENST00000503319 491 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 AC073648.3-201ENST00000504939 925 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 AC093763.2-201ENST00000505334 1223 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.45□□□□□ -1.22
ERCC4Q92889 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.45□□□□□ -1.22
ERCC4Q92889 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.45□□□□□ -1.22
ERCC4Q92889 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC7.45□□□□□ -1.22
ERCC4Q92889 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC7.45□□□□□ -1.22
ERCC4Q92889 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC7.45□□□□□ -1.22
ERCC4Q92889 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.45□□□□□ -1.22
ERCC4Q92889 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC4Q92889 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.45□□□□□ -1.22
ERCC4Q92889 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.45□□□□□ -1.22
ERCC4Q92889 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 AC061999.1-201ENST00000624454 177 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 AC069542.2-201ENST00000624816 216 ntBASIC7.45□□□□□ -1.22
ERCC4Q92889 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.45□□□□□ -1.22
ERCC4Q92889 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC4Q92889 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC4Q92889 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC4Q92889 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC4Q92889 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC4Q92889 AL731556.1-201ENST00000394628 3711 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC4Q92889 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
ERCC4Q92889 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC4Q92889 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC4Q92889 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC4Q92889 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
ERCC4Q92889 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC4Q92889 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC4Q92889 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC4Q92889 RNU12-2P-201ENST00000364789 156 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 RNA5SP355-201ENST00000365317 135 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 AL358178.1-201ENST00000407698 397 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC4Q92889 RPS7P12-201ENST00000422385 582 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC4Q92889 GTF3AP6-201ENST00000432585 986 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.44□□□□□ -1.22
ERCC4Q92889 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC7.44□□□□□ -1.22
ERCC4Q92889 SCDP1-201ENST00000455244 1081 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 UOX-201ENST00000471089 899 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC4Q92889 AP003080.1-202ENST00000526526 915 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 KCTD9P4-201ENST00000526766 1166 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC4Q92889 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.44□□□□□ -1.22
ERCC4Q92889 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.44□□□□□ -1.22
ERCC4Q92889 AC023310.2-201ENST00000553844 547 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 FAM30C-201ENST00000561158 410 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC4Q92889 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC4Q92889 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC4Q92889 AC097467.4-201ENST00000605504 141 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 AC034236.3-201ENST00000605999 461 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 AC027506.1-201ENST00000621395 198 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC4Q92889 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC4Q92889 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC4Q92889 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC4Q92889 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC4Q92889 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC4Q92889 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
ERCC4Q92889 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC4Q92889 AL513548.1-201ENST00000562904 1724 ntBASIC7.44□□□□□ -1.22
ERCC4Q92889 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC4Q92889 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC4Q92889 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC4Q92889 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
ERCC4Q92889 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
ERCC4Q92889 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC4Q92889 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
ERCC4Q92889 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC4Q92889 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC4Q92889 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
ERCC4Q92889 RNA5SP302-201ENST00000364896 100 ntBASIC7.43□□□□□ -1.22
ERCC4Q92889 RNU1-46P-201ENST00000384425 164 ntBASIC7.43□□□□□ -1.22
ERCC4Q92889 MIR99A-201ENST00000384906 81 ntBASIC7.43□□□□□ -1.22
ERCC4Q92889 MIR431-201ENST00000385266 114 ntBASIC7.43□□□□□ -1.22
ERCC4Q92889 RNA5SP474-201ENST00000391234 90 ntBASIC7.43□□□□□ -1.22
ERCC4Q92889 AL049697.3-201ENST00000406493 982 ntBASIC7.43□□□□□ -1.22
ERCC4Q92889 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC4Q92889 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms