Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 PRR13P5-201ENST00000596581 442 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AC124856.1-201ENST00000600819 896 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AC139795.3-201ENST00000606358 541 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 VIS1.1-201ENST00000610517 203 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AL162574.1-201ENST00000615702 950 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 FRG1HP-204ENST00000617940 757 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AC140479.4-205ENST00000636339 820 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 MIR1322-201ENST00000638013 71 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 LINC02211-204ENST00000642024 1070 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 CASC19-281ENST00000642118 1554 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 CCDC150P1-201ENST00000537123 2215 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC019178.1-201ENST00000392337 440 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 LDHAP5-201ENST00000394996 622 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 RPL23AP85-201ENST00000421838 433 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AL365396.1-201ENST00000430854 671 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 MTCO3P5-201ENST00000433620 714 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC009518.3-201ENST00000438972 253 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 DNAJA1P5-201ENST00000440278 943 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC234771.4-201ENST00000441416 730 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 KF459542.1-201ENST00000450908 553 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC022080.2-201ENST00000452932 533 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC019084.1-201ENST00000457337 432 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 BX323845.2-201ENST00000458382 234 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 RN7SL325P-201ENST00000460434 283 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC040975.1-201ENST00000472104 316 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 CDH12P2-201ENST00000504393 298 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 NACAP5-201ENST00000509863 636 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC092593.2-201ENST00000513866 913 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 RNU5A-4P-201ENST00000516588 111 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC090819.1-201ENST00000523800 1111 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC109635.6-201ENST00000525487 1113 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 OR5M6P-201ENST00000530227 937 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC069240.2-201ENST00000550242 609 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AL354943.1-201ENST00000572103 781 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 RN7SL66P-201ENST00000582099 264 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC010620.1-201ENST00000601088 1102 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 HIRAP1-201ENST00000605318 787 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC013468.1-201ENST00000608680 598 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC024257.5-201ENST00000612739 531 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AL161420.1-201ENST00000619393 264 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AC008626.2-201ENST00000624425 248 ntBASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms