Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 OR56A4-201ENST00000330728 1209 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 RNA5SP512-201ENST00000364550 120 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 MRPS6P2-201ENST00000381143 370 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AL034417.1-201ENST00000399343 800 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AL033519.1-201ENST00000407266 307 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AC117434.1-201ENST00000419971 836 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 Z68868.1-201ENST00000429048 544 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 GAPDHP19-201ENST00000431768 1005 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 FTLP19-201ENST00000433300 394 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AC064862.5-201ENST00000440618 334 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 COL11A2P1-205ENST00000441798 676 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AL031681.1-201ENST00000443304 400 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AC239798.3-201ENST00000454459 408 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AC019084.1-201ENST00000457337 432 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 RPL23AP68-201ENST00000480924 445 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 SNRPCP11-201ENST00000492453 205 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 RN7SL208P-201ENST00000577964 296 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 MIR4732-201ENST00000581873 76 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AC010615.3-201ENST00000597319 394 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AL356986.1-201ENST00000604085 341 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AL390877.1-201ENST00000605704 214 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 SNORA35B-201ENST00000607417 129 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 MIR6885-201ENST00000612241 66 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AC015660.5-201ENST00000623238 564 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AC114546.4-201ENST00000624413 369 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 AC073869.7-201ENST00000640874 297 ntBASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.07□□□□□ -1.44
NUP54Q7Z3B4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 DNM1P47-203ENST00000571780 12667 ntBASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 AL139384.2-201ENST00000613809 3590 ntBASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 AC005618.1-201ENST00000606901 3148 ntBASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 SSXP3-201ENST00000442971 1300 ntBASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 STAG3L4-201ENST00000352103 530 ntBASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 PA2G4P1-201ENST00000442248 1197 ntBASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 GAPDHP37-201ENST00000442317 968 ntBASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 RN7SL612P-201ENST00000497704 295 ntBASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 MTND6P8-201ENST00000503471 522 ntBASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 OR9G2P-201ENST00000533326 880 ntBASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 AL953862.2-201ENST00000603089 820 ntBASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 LSM1P2-201ENST00000604911 322 ntBASIC6.06□□□□□ -1.44
NUP54Q7Z3B4 AC097467.4-201ENST00000605504 141 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms