Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC122718.2-201ENST00000505325 591 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AL390198.2-201ENST00000510553 222 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC093816.1-201ENST00000515076 913 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 TDGP1-201ENST00000543961 1229 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 CTSLP2-201ENST00000580501 394 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 MIR4271-201ENST00000582451 67 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC091133.5-201ENST00000603088 301 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC012676.3-201ENST00000614983 479 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 MIR7854-201ENST00000620068 65 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC061999.1-201ENST00000624454 177 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC018659.2-201ENST00000624690 715 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 AL354702.2-202ENST00000641481 890 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC013488.1-201ENST00000526618 1838 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 OR11H13P-201ENST00000359695 979 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 RNA5SP514-201ENST00000363717 111 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 RNU1-55P-201ENST00000365510 158 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 RPL9P21-201ENST00000392269 505 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 AL050305.1-201ENST00000399993 1230 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 VIM2P-201ENST00000402383 1294 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 PRELID1P1-201ENST00000403549 660 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 GPN3P1-201ENST00000423883 535 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 PSMC1P2-201ENST00000423961 1204 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 UBBP5-201ENST00000446970 266 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC097359.1-201ENST00000447946 463 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCXQ7RTU7 RPL26P30-201ENST00000453533 435 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 OR7E22P-201ENST00000478335 1035 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 RPS27P20-201ENST00000492051 246 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 RPL37P23-201ENST00000492641 294 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 H3F3AP3-201ENST00000497682 407 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC093870.1-201ENST00000506837 213 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 RN7SKP70-201ENST00000516655 271 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.26□□□□□ -1.73
SCXQ7RTU7 OR4A21P-201ENST00000532759 944 ntBASIC4.26□□□□□ -1.73
SCXQ7RTU7 AC124891.1-201ENST00000536322 519 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms