Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RN7SKP197-201ENST00000517077 297 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC9.12□□□□□ -0.95
VARS2Q5ST30 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC9.12□□□□□ -0.95
VARS2Q5ST30 MTND6P20-201ENST00000522986 418 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC9.12□□□□□ -0.95
VARS2Q5ST30 AP002404.1-201ENST00000532005 451 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VARS2Q5ST30 AP003034.1-201ENST00000534621 422 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VARS2Q5ST30 AL109628.2-201ENST00000554037 201 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC9.12□□□□□ -0.95
VARS2Q5ST30 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC9.12□□□□□ -0.95
VARS2Q5ST30 AC005668.1-201ENST00000571142 476 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 RPS7P1-201ENST00000571702 585 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC9.12□□□□□ -0.95
VARS2Q5ST30 H3F3BP2-201ENST00000583907 357 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 MIR5008-201ENST00000584300 94 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC9.12□□□□□ -0.95
VARS2Q5ST30 FAM30B-201ENST00000611556 397 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 AC004696.1-201ENST00000614345 607 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 AC108479.2-201ENST00000617314 601 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 AC139792.3-201ENST00000623525 224 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 AL356095.2-201ENST00000624025 457 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 AC135068.12-201ENST00000637370 931 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 CRYM-AS1-204ENST00000637983 556 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 FBXW11P1-201ENST00000393804 1474 ntBASIC9.12□□□□□ -0.95
VARS2Q5ST30 THBS3-211ENST00000541990 2928 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VARS2Q5ST30 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VARS2Q5ST30 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
VARS2Q5ST30 OXNAD1-207ENST00000606098 2288 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
VARS2Q5ST30 L3MBTL3-203ENST00000368139 4148 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
VARS2Q5ST30 ZFP42-202ENST00000509524 2480 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
VARS2Q5ST30 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VARS2Q5ST30 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VARS2Q5ST30 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC9.12□□□□□ -0.95
VARS2Q5ST30 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VARS2Q5ST30 SH3GL3-201ENST00000324537 2012 ntTSL 2 BASIC9.12□□□□□ -0.95
VARS2Q5ST30 LIMCH1-215ENST00000512632 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
VARS2Q5ST30 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 METTL15-204ENST00000407364 4242 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 NAALAD2-210ENST00000534061 3600 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 BMS1P2-202ENST00000532854 1858 ntTSL 5 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 GJA5-202ENST00000579774 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 TP63-202ENST00000320472 2032 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 TP63-210ENST00000440651 2031 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 SLC16A7-214ENST00000552024 1815 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 RPL11P4-201ENST00000332269 436 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 MIR185-201ENST00000385288 82 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 SNORA35-201ENST00000386104 128 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 MED28P1-201ENST00000399158 571 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC009319.1-201ENST00000411493 754 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 HCG21-204ENST00000419481 605 ntTSL 3 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 CYP4F26P-202ENST00000433357 852 ntTSL 5 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC002486.1-201ENST00000435098 391 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC002075.1-201ENST00000457396 676 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 RNU7-140P-201ENST00000459546 60 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC104164.4-201ENST00000483456 493 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 RPS7P6-201ENST00000485777 579 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC008581.1-201ENST00000512650 385 ntTSL 3 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC105031.1-201ENST00000518550 476 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 RNU6-988P-201ENST00000519081 107 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC008802.1-201ENST00000519121 791 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC005832.3-201ENST00000537929 631 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC018653.2-201ENST00000540190 238 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 BTG1P1-201ENST00000540396 508 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms