Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL391987.1-201ENST00000441025 200 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AC018638.3-201ENST00000461273 132 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AC115223.1-201ENST00000466377 870 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 Y_RNA.667-201ENST00000516212 107 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 RNA5SP434-201ENST00000516647 121 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AC060775.1-201ENST00000518241 520 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 IGKV1D-22-201ENST00000518953 324 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AC092865.1-201ENST00000544395 1023 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AP001823.1-201ENST00000604056 1003 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AL513218.1-201ENST00000606527 391 ntBASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHROOM1Q2M3G4 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.34□□□□□ -1.24
SHROOM1Q2M3G4 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
SHROOM1Q2M3G4 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
SHROOM1Q2M3G4 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
SHROOM1Q2M3G4 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.34□□□□□ -1.24
SHROOM1Q2M3G4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
SHROOM1Q2M3G4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AL049634.1-201ENST00000453770 1720 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AC104581.5-201ENST00000624171 7141 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AL096800.1-201ENST00000405326 893 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AC104843.2-201ENST00000427666 297 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AC002553.3-201ENST00000453002 341 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AC104109.1-201ENST00000498563 436 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AC091965.3-201ENST00000506236 208 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AC021269.1-201ENST00000526860 705 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AP005119.1-201ENST00000580956 292 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AC027229.1-201ENST00000583887 253 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AP005431.1-201ENST00000618479 319 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 MIR7159-201ENST00000620587 66 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AC073488.3-201ENST00000631611 778 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 AP003175.1-201ENST00000641383 6658 ntBASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
SHROOM1Q2M3G4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 AC016251.2-201ENST00000623393 3089 ntBASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 AL161901.1-201ENST00000624954 3425 ntBASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 AC022325.1-201ENST00000502748 2199 ntBASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 MAPK10-287ENST00000641217 3037 ntBASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 AC007406.5-201ENST00000570140 3170 ntBASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 RNU1-134P-201ENST00000362935 165 ntBASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 RNA5SP510-201ENST00000364697 99 ntBASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 SUGT1P2-201ENST00000379452 992 ntBASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 AL132875.1-201ENST00000403623 949 ntBASIC7.32□□□□□ -1.24
SHROOM1Q2M3G4 RN7SKP144-201ENST00000411108 279 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms