Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PTCH1Q13635 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
PTCH1Q13635 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
PTCH1Q13635 GNL2P1-201ENST00000451274 2190 ntBASIC8.63□□□□□ -1.03
PTCH1Q13635 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PTCH1Q13635 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PTCH1Q13635 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PTCH1Q13635 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
PTCH1Q13635 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC8.63□□□□□ -1.03
PTCH1Q13635 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PTCH1Q13635 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
PTCH1Q13635 KIF4CP-201ENST00000422742 1279 ntBASIC8.63□□□□□ -1.03
PTCH1Q13635 AC127526.2-201ENST00000426436 775 ntBASIC8.63□□□□□ -1.03
PTCH1Q13635 BX119321.1-201ENST00000428912 797 ntBASIC8.63□□□□□ -1.03
PTCH1Q13635 RPL36AP39-201ENST00000445859 318 ntBASIC8.63□□□□□ -1.03
PTCH1Q13635 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC8.63□□□□□ -1.03
PTCH1Q13635 IGLV2-28-201ENST00000520681 304 ntBASIC8.63□□□□□ -1.03
PTCH1Q13635 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.63□□□□□ -1.03
PTCH1Q13635 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
PTCH1Q13635 AL356801.1-201ENST00000559320 294 ntBASIC8.63□□□□□ -1.03
PTCH1Q13635 OR8G3P-202ENST00000641572 1255 ntBASIC8.63□□□□□ -1.03
PTCH1Q13635 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
PTCH1Q13635 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
PTCH1Q13635 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTCH1Q13635 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTCH1Q13635 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
PTCH1Q13635 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTCH1Q13635 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTCH1Q13635 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTCH1Q13635 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PTCH1Q13635 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTCH1Q13635 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.62□□□□□ -1.03
PTCH1Q13635 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PTCH1Q13635 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTCH1Q13635 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTCH1Q13635 OR11H13P-201ENST00000359695 979 ntBASIC8.62□□□□□ -1.03
PTCH1Q13635 RN7SKP160-201ENST00000363804 340 ntBASIC8.62□□□□□ -1.03
PTCH1Q13635 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
PTCH1Q13635 BPHL-201ENST00000380368 797 ntTSL 5 BASIC8.62□□□□□ -1.03
PTCH1Q13635 AL445238.1-204ENST00000400311 463 ntBASIC8.62□□□□□ -1.03
PTCH1Q13635 AC136624.1-201ENST00000400791 413 ntBASIC8.62□□□□□ -1.03
PTCH1Q13635 RN7SKP161-201ENST00000411110 305 ntBASIC8.62□□□□□ -1.03
PTCH1Q13635 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PTCH1Q13635 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC8.62□□□□□ -1.03
PTCH1Q13635 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC8.62□□□□□ -1.03
PTCH1Q13635 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC8.62□□□□□ -1.03
PTCH1Q13635 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.62□□□□□ -1.03
PTCH1Q13635 AC092944.2-201ENST00000605443 889 ntBASIC8.62□□□□□ -1.03
PTCH1Q13635 AC006924.1-201ENST00000610750 559 ntBASIC8.62□□□□□ -1.03
PTCH1Q13635 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PTCH1Q13635 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC8.62□□□□□ -1.03
PTCH1Q13635 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC8.61□□□□□ -1.03
PTCH1Q13635 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC8.61□□□□□ -1.03
PTCH1Q13635 AC092725.2-201ENST00000567658 1389 ntBASIC8.61□□□□□ -1.03
PTCH1Q13635 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
PTCH1Q13635 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
PTCH1Q13635 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
PTCH1Q13635 LARS-212ENST00000510191 3737 ntTSL 2 BASIC8.61□□□□□ -1.03
PTCH1Q13635 Z93929.1-201ENST00000418200 1475 ntBASIC8.61□□□□□ -1.03
PTCH1Q13635 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC8.61□□□□□ -1.03
PTCH1Q13635 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC8.61□□□□□ -1.03
PTCH1Q13635 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 AC008171.1-201ENST00000395058 200 ntBASIC8.61□□□□□ -1.03
PTCH1Q13635 DPPA2P3-201ENST00000411853 655 ntBASIC8.61□□□□□ -1.03
PTCH1Q13635 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC8.61□□□□□ -1.03
PTCH1Q13635 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC8.61□□□□□ -1.03
PTCH1Q13635 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC8.61□□□□□ -1.03
PTCH1Q13635 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC8.61□□□□□ -1.03
PTCH1Q13635 RN7SL269P-201ENST00000467795 305 ntBASIC8.61□□□□□ -1.03
PTCH1Q13635 AC092824.1-201ENST00000483524 576 ntBASIC8.61□□□□□ -1.03
PTCH1Q13635 SNORA58-201ENST00000505219 137 ntBASIC8.61□□□□□ -1.03
PTCH1Q13635 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC8.61□□□□□ -1.03
PTCH1Q13635 AC022404.1-201ENST00000555320 273 ntBASIC8.61□□□□□ -1.03
PTCH1Q13635 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC8.61□□□□□ -1.03
PTCH1Q13635 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC8.61□□□□□ -1.03
PTCH1Q13635 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.61□□□□□ -1.03
PTCH1Q13635 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
PTCH1Q13635 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 AC012254.3-201ENST00000591183 2117 ntBASIC8.61□□□□□ -1.03
PTCH1Q13635 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTCH1Q13635 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTCH1Q13635 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTCH1Q13635 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTCH1Q13635 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
PTCH1Q13635 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PTCH1Q13635 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC8.6□□□□□ -1.03
PTCH1Q13635 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTCH1Q13635 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PTCH1Q13635 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms