Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
LTBQ06643 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
LTBQ06643 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 AC026310.1-201ENST00000396004 378 ntBASIC5.97□□□□□ -1.45
LTBQ06643 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 AL353626.3-201ENST00000413399 657 ntBASIC5.97□□□□□ -1.45
LTBQ06643 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.97□□□□□ -1.45
LTBQ06643 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.97□□□□□ -1.45
LTBQ06643 GAPDHP20-201ENST00000444107 1007 ntBASIC5.97□□□□□ -1.45
LTBQ06643 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.97□□□□□ -1.45
LTBQ06643 AL513343.1-201ENST00000451818 792 ntBASIC5.97□□□□□ -1.45
LTBQ06643 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.97□□□□□ -1.45
LTBQ06643 RN7SL70P-201ENST00000478322 302 ntBASIC5.97□□□□□ -1.45
LTBQ06643 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.97□□□□□ -1.45
LTBQ06643 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.97□□□□□ -1.45
LTBQ06643 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.97□□□□□ -1.45
LTBQ06643 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.97□□□□□ -1.45
LTBQ06643 AC067805.1-201ENST00000559344 470 ntBASIC5.97□□□□□ -1.45
LTBQ06643 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.97□□□□□ -1.45
LTBQ06643 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.97□□□□□ -1.45
LTBQ06643 AL356986.1-201ENST00000604085 341 ntBASIC5.97□□□□□ -1.45
LTBQ06643 AC016542.1-201ENST00000608259 493 ntBASIC5.97□□□□□ -1.45
LTBQ06643 AC073389.3-201ENST00000609434 935 ntBASIC5.97□□□□□ -1.45
LTBQ06643 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 AC004241.2-201ENST00000614562 444 ntBASIC5.97□□□□□ -1.45
LTBQ06643 AC012676.3-201ENST00000614983 479 ntBASIC5.97□□□□□ -1.45
LTBQ06643 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.97□□□□□ -1.45
LTBQ06643 AC005277.2-201ENST00000617898 390 ntBASIC5.97□□□□□ -1.45
LTBQ06643 AP001052.1-201ENST00000626421 99 ntBASIC5.97□□□□□ -1.45
LTBQ06643 HPVC1-201ENST00000629899 1198 ntBASIC5.97□□□□□ -1.45
LTBQ06643 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 API5P1-201ENST00000424316 1510 ntBASIC5.97□□□□□ -1.45
LTBQ06643 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.97□□□□□ -1.45
LTBQ06643 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.97□□□□□ -1.45
LTBQ06643 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC5.97□□□□□ -1.45
LTBQ06643 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
LTBQ06643 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
LTBQ06643 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.96□□□□□ -1.45
LTBQ06643 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.45
LTBQ06643 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.45
LTBQ06643 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.96□□□□□ -1.45
LTBQ06643 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LTBQ06643 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.96□□□□□ -1.45
LTBQ06643 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LTBQ06643 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.96□□□□□ -1.45
LTBQ06643 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
LTBQ06643 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
LTBQ06643 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.96□□□□□ -1.46
LTBQ06643 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 RNA5SP321-201ENST00000362722 111 ntBASIC5.96□□□□□ -1.46
LTBQ06643 RNU1-46P-201ENST00000384425 164 ntBASIC5.96□□□□□ -1.46
LTBQ06643 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LTBQ06643 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LTBQ06643 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
LTBQ06643 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.96□□□□□ -1.46
LTBQ06643 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.96□□□□□ -1.46
LTBQ06643 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.96□□□□□ -1.46
LTBQ06643 CLUHP1-201ENST00000435012 1190 ntBASIC5.96□□□□□ -1.46
LTBQ06643 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.96□□□□□ -1.46
LTBQ06643 AC128677.1-201ENST00000436016 442 ntBASIC5.96□□□□□ -1.46
LTBQ06643 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.96□□□□□ -1.46
LTBQ06643 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.96□□□□□ -1.46
LTBQ06643 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.96□□□□□ -1.46
LTBQ06643 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.96□□□□□ -1.46
LTBQ06643 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.96□□□□□ -1.46
LTBQ06643 AC021006.1-201ENST00000489849 553 ntBASIC5.96□□□□□ -1.46
LTBQ06643 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.96□□□□□ -1.46
LTBQ06643 NPM1P27-201ENST00000502784 830 ntBASIC5.96□□□□□ -1.46
LTBQ06643 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
LTBQ06643 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.96□□□□□ -1.46
LTBQ06643 AL390198.2-201ENST00000510553 222 ntBASIC5.96□□□□□ -1.46
LTBQ06643 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.96□□□□□ -1.46
LTBQ06643 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.96□□□□□ -1.46
LTBQ06643 RNA5SP318-201ENST00000516352 92 ntBASIC5.96□□□□□ -1.46
LTBQ06643 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.96□□□□□ -1.46
LTBQ06643 AC087360.1-201ENST00000518788 616 ntBASIC5.96□□□□□ -1.46
LTBQ06643 IGLV3-6-201ENST00000523937 250 ntBASIC5.96□□□□□ -1.46
LTBQ06643 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.96□□□□□ -1.46
LTBQ06643 OR4A46P-201ENST00000527255 933 ntBASIC5.96□□□□□ -1.46
LTBQ06643 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.96□□□□□ -1.46
LTBQ06643 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.96□□□□□ -1.46
LTBQ06643 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms