Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AC126474.2-201ENST00000623268 1750 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 LINC01616-201ENST00000561816 2280 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H1AQ02539 AP005435.3-201ENST00000531260 3198 ntBASIC4.88□□□□□ -1.63
HIST1H1AQ02539 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 CASC19-260ENST00000641828 2001 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 RNA5SP382-201ENST00000363355 112 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 RPL23AP17-201ENST00000401064 499 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AL139135.1-201ENST00000412675 209 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 OR52N3P-201ENST00000413417 934 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 RANP6-201ENST00000413691 644 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 VTI1BP4-201ENST00000427516 527 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AL596268.1-201ENST00000427910 1048 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 ATP6V1G1P4-201ENST00000438388 335 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AL356133.1-201ENST00000444762 372 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 Z83838.1-202ENST00000456225 839 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 RN7SKP198-201ENST00000459286 306 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 RN7SL552P-201ENST00000462094 276 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 RPL23AP64-201ENST00000469465 435 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 UOX-201ENST00000471089 899 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AC089984.3-201ENST00000552838 363 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AC002069.2-201ENST00000603580 883 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AC099777.1-201ENST00000603779 1070 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 HNRNPA3P9-201ENST00000604913 979 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 RNA5SP439-201ENST00000617595 124 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 PPBPP2-201ENST00000513150 1362 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 SLC2A3P4-201ENST00000521259 1471 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H1AQ02539 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.87□□□□□ -1.63
HIST1H1AQ02539 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 ZNF101P1-201ENST00000435701 1720 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.86□□□□□ -1.63
HIST1H1AQ02539 GNG5P2-201ENST00000372054 207 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AC245036.1-201ENST00000391727 309 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AL139100.1-201ENST00000408001 498 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 RN7SKP91-201ENST00000410852 288 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 RN7SKP17-201ENST00000411242 351 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 SETP22-201ENST00000412243 957 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 AL359092.1-201ENST00000417156 265 ntBASIC4.86□□□□□ -1.63
HIST1H1AQ02539 SMARCE1P1-201ENST00000417747 1186 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms